RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PRMT7Q9NVM4 692 aaPredicted RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 SAE1Q9UBE0 346 aaPredicted RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 CNOT7Q9UIV1 285 aaKnown RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 DMTF1Q9Y222 760 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 METTL21EPA6NDL7 271 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 SLC2A4P14672 509 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 IDH2P48735 452 aaKnown RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 ACAD10Q6JQN1 1059 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 MB21D2Q8IYB1 491 aaPredicted RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 RPRD1AQ96P16 312 aaPredicted RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 BBS4Q96RK4 519 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 NFKBIZQ9BYH8 718 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 GPC6Q9Y625 555 aaPredicted RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 STARD3Q14849 445 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 ZNHIT3Q15649 155 aaPredicted RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 GLI2P10070 1586 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 A0A0A6YYK5 440 aaPredicted RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 DLG4P78352 724 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 MCL1Q07820 350 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 PACS1Q6VY07 963 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 HIPK1Q86Z02 1210 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 CRELD1Q96HD1 420 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 AIFM2Q9BRQ8 373 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 AASDHPPTQ9NRN7 309 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 PNPLA3Q9NST1 481 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 GJB4Q9NTQ9 266 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 CCDC167Q9P0B6 97 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 NAA20P61599 178 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 PGRMC2O15173 223 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 NPY2RP49146 381 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 STOX1Q6ZVD7 989 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 MARK2Q7KZI7 788 aaKnown RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 ARL10Q8N8L6 244 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 C17orf50Q8WW18 174 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 TDRD1Q9BXT4 1180 aaKnown RBP9.47□□□□□ -0.89
VPS13A-203ENST00000360280 FAM50BQ9Y247 325 aa9.47□□□□□ -0.89
VPS13A-203ENST00000360280 KBTBD13C9JR72 458 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 M0QYT0 321 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 FGFR3P22607 806 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 MRPS22P82650 360 aaKnown RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 DSG4Q86SJ6 1040 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 CCDC177Q9NQR7 707 aaPredicted RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 OR14I1A6ND48 311 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 UGT1A5P35504 534 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 BCAT1P54687 386 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 SMIM11AP58511 58 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 PI16Q6UXB8 463 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 C17orf75Q9HAS0 396 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 TAF6LQ9Y6J9 622 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 FSBPO95073 299 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 HLA-DRAP01903 254 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 CDH17Q12864 832 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 CYP2R1Q6VVX0 501 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 KLHL23Q8NBE8 558 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 MAGEC3Q8TD91 643 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 UBQLN1Q9UMX0 589 aaKnown RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 POLRMTO00411 1230 aaKnown RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 PSMG1O95456 288 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 LRG1P02750 347 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 CCR4P51679 360 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 SKIV2LQ15477 1246 aaKnown RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 KBTBD2Q8IY47 623 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 DCP1AQ9NPI6 582 aaPredicted RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 GNPTGQ9UJJ9 305 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 FBXO21O94952 628 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 HKDC1Q2TB90 917 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 PREPLQ4J6C6 727 aaPredicted RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 NUP50Q9UKX7 468 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 ATP5F1P24539 256 aaPredicted RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 MFSD7Q6UXD7 560 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 KYAT3Q6YP21 454 aaKnown RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 MAGEE2Q8TD90 523 aaPredicted RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 MAGEB10Q96LZ2 347 aaPredicted RBP9.46□□□□□ -0.89
VPS13A-203ENST00000360280 TAS2R13Q9NYV9 303 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 KIAA1257Q9ULG3 409 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 TBC1D24Q9ULP9 559 aa9.46□□□□□ -0.89
VPS13A-203ENST00000360280 ERI2A8K979 691 aaKnown RBP9.46□□□□□ -0.9
VPS13A-203ENST00000360280 ATF4P18848 351 aaPredicted RBP9.46□□□□□ -0.9
VPS13A-203ENST00000360280 ARFIP1P53367 373 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF549Q6P9A3 640 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 SCAIQ8N9R8 606 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 FUT8Q9BYC5 575 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 LOC110117498-PIK3R3F6TDL0 507 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF432O94892 652 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 ITGA4P13612 1032 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 NPR2P20594 1047 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 MTAPQ13126 283 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 AGMOQ6ZNB7 445 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF37AP17032 561 aaPredicted RBP9.46□□□□□ -0.9
VPS13A-203ENST00000360280 RPL3P39023 403 aaKnown RBP9.46□□□□□ -0.9
VPS13A-203ENST00000360280 CDK16Q00536 496 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 SUZ12Q15022 739 aaKnown RBP9.46□□□□□ -0.9
VPS13A-203ENST00000360280 LPAR1Q92633 364 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 PTCD3Q96EY7 689 aaKnown RBP9.46□□□□□ -0.9
VPS13A-203ENST00000360280 GGA3Q9NZ52 723 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 ARMC8Q8IUR7 673 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 MARCH10Q8NA82 808 aaPredicted RBP9.46□□□□□ -0.9
VPS13A-203ENST00000360280 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
VPS13A-203ENST00000360280 KIF28PB7ZC32 967 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms