RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PHC3Q8NDX5 983 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 CHP1Q99653 195 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 ATXN3LQ9H3M9 355 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 NT5MQ9NPB1 228 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 NDOR1Q9UHB4 597 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 PTGISQ16647 500 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 LIN54Q6MZP7 749 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 LRRC39Q96DD0 335 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 TPRKBQ9Y3C4 175 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 UBDO15205 165 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 NPR3P17342 541 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 INO80DQ53TQ3 878 aaPredicted RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 C2CD6Q53TS8 623 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 KIAA0408Q6ZU52 694 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 RP9Q8TA86 221 aaKnown RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 Q96MT0 163 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 POLR1EQ9GZS1 481 aaKnown RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 ASAH2Q9NR71 780 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 SNX13Q9Y5W8 968 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 NEXMIFQ5QGS0 1516 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 PTPN4P29074 926 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 SAMD4BQ5PRF9 694 aaKnown RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 TMEM86AQ8N2M4 240 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 ZNF671Q8TAW3 534 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 DNAJC16Q9Y2G8 782 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 FGF19O95750 216 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 ITGA2P17301 1181 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 FASP25445 335 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 TOP3AQ13472 1001 aaPredicted RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 SH3BP5LQ7L8J4 393 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 BEND7Q8N7W2 519 aaPredicted RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 SPATA5L1Q9BVQ7 753 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 FAM192AQ9GZU8 254 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 ZNF268Q14587 947 aaPredicted RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 AGKQ53H12 422 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 RSBN1Q5VWQ0 802 aaPredicted RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 GALNT18Q6P9A2 607 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 C4orf19Q8IY42 314 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 IL22Q9GZX6 179 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 SKAP2O75563 359 aaPredicted RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 IL12RB1P42701 662 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 CPA2P48052 419 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 SARSP49591 514 aaKnown RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 ZC2HC1CQ53FD0 456 aaPredicted RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 ILDR2Q71H61 639 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 TMPRSS6Q8IU80 811 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 AGO4Q9HCK5 861 aaKnown RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 ANKDD1BA6NHY2 528 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 C1QTNF3-AMACRE9PGA6 284 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 LBPP18428 481 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 CES1P23141 567 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 AHI1Q8N157 1196 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 MYCBPAPQ8TBZ2 947 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 FIG4Q92562 907 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 NSMCE2Q96MF7 247 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 ESRP1Q6NXG1 681 aaKnown RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 REPS2Q8NFH8 660 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 SUSD6Q92537 303 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 RERGQ96A58 199 aaPredicted RBP9.86□□□□□ -0.83
CUX1-203ENST00000360264 REEP1Q9H902 201 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 E2F8A0AVK6 867 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 CCR4P51679 360 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 CSNK2BP67870 215 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 IKBKEQ14164 716 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 DHFR2Q86XF0 187 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 CROTQ9UKG9 612 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 GSTK1Q9Y2Q3 226 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 ADGRB3O60242 1522 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 CASTOR2A6NHX0 329 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 GCATO75600 419 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 SERPINE1P05121 402 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 TRAF2Q12933 501 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 AFTPHQ6ULP2 937 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 NIPA1Q7RTP0 329 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 UMODL1Q5DID0 1318 aa9.86□□□□□ -0.83
CUX1-203ENST00000360264 CLTCL1P53675 1640 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 FGF10O15520 208 aaPredicted RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 PDPK2PQ6A1A2 396 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 FAM117BQ6P1L5 589 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 BCL2L14Q9BZR8 327 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 JCHAINP01591 159 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 GPD2P43304 727 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 CCZ1BP86790 482 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 CCZ1P86791 482 aaPredicted RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 FIGNQ5HY92 759 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 GNPTGQ9UJJ9 305 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 SERPINB7O75635 380 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 FGRP09769 529 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 SPDYCQ5MJ68 293 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 C11orf63Q6NUN7 778 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 BTBD10Q9BSF8 475 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 ABHD16BQ9H3Z7 469 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 CISHQ9NSE2 258 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 H3BRB1 525 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 CPSF4O95639 269 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 OGNP20774 298 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 ZDHHC20Q5W0Z9 365 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 TLK2Q86UE8 772 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 TUT1Q9H6E5 874 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 YY1P25490 414 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms