RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 FGF10O15520 208 aaPredicted RBP12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 HOXC11O43248 304 aaPredicted RBP12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 ZNF500O60304 480 aaPredicted RBP12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 TBL1XO60907 577 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 CNTN5O94779 1100 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 CYBBP04839 570 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 CYP17A1P05093 508 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 ASGR2P07307 311 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 AMPD1P23109 780 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 PTPN7P35236 360 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 CDH4P55283 916 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 GAD2Q05329 585 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 TNK2Q07912 1038 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 ALFQ53S48 1182 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 TFDP3Q5H9I0 405 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 RWDD4Q6NW29 188 aaKnown RBP12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 CHST9Q7L1S5 443 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 NLRP14Q86W24 1093 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 DDI1Q8WTU0 396 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 CATSPERBQ9H7T0 1116 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 PRDM16Q9HAZ2 1276 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 ARHGEF4Q9NR80 690 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 TMEM248Q9NWD8 314 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 SNX12Q9UMY4 172 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 EFR3BQ9Y2G0 817 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 hCG_1818297A0A087WSY0 165 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 TYW5A2RUC4 315 aaKnown RBP12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 DCLK1O15075 740 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 DAPK3O43293 454 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 CLDN11O75508 207 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 ADH1CP00326 375 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 ERCC2P18074 760 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 HOXD9P28356 352 aaPredicted RBP12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 CASQ1P31415 396 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 CETN2P41208 172 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 NR1H3Q13133 447 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 ZNF211Q13398 564 aaPredicted RBP12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 TDGQ13569 410 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 GAB4Q2WGN9 574 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 AADACL2Q6P093 401 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 CPA6Q8N4T0 437 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 PQLC3Q8N755 202 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 RTL3Q8N8U3 475 aaKnown RBP12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 PBKQ96KB5 322 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 BBS2Q9BXC9 721 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 OSBPL8Q9BZF1 889 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 GTSE1Q9NYZ3 720 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 MUTYHQ9UIF7 546 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 FBXO10Q9UK96 956 aa12.77□□□□□ -0.37
NIF3L1-201ENST00000359683 TECTAO75443 2155 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 A0A1B0GVM2 712 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 CES2O00748 559 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 LUC7L3O95232 432 aaKnown RBP12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 ADH5P11766 374 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 KRT10P13645 584 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 TYRP14679 529 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 TCP1P17987 556 aaKnown RBP12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 ANO4Q32M45 955 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 ITPRIPL2Q3MIP1 535 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 SLC9A4Q6AI14 798 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 CIR1Q86X95 450 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 CCDC50Q8IVM0 306 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 OSBPL9Q96SU4 736 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 PSMB7Q99436 277 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 MAK16Q9BXY0 300 aaKnown RBP12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 KLC2Q9H0B6 622 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 SLC2A4RGQ9NR83 387 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 ETNK2Q9NVF9 386 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 DONSONQ9NYP3 566 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 PLK2Q9NYY3 685 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 TBC1D30Q9Y2I9 924 aa12.76□□□□□ -0.37
NIF3L1-201ENST00000359683 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 NEDD8-MDP1E9PL57 170 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 CACNG3O60359 315 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 SRFP11831 508 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 CXCR5P32302 372 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 MAPKAPK2P49137 400 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 AMPD2Q01433 879 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 ADCY2Q08462 1091 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 ZNF177Q13360 481 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 TFDP2Q14188 446 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 PAFAH1B3Q15102 231 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 LLGL1Q15334 1064 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 SEL1L2Q5TEA6 688 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 RNF135Q8IUD6 432 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 ETFBKMTQ8IXQ9 262 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 RASGEF1CQ8N431 466 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 FIBINQ8TAL6 211 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 DNASE1L2Q92874 299 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 BHMTQ93088 406 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 HERPUD2Q9BSE4 406 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 HEMGNQ9BXL5 484 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 NDFIP2Q9NV92 336 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 TTC7AQ9ULT0 858 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 CLEC4EQ9ULY5 219 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 SAR1BQ9Y6B6 198 aa12.75□□□□□ -0.37
NIF3L1-201ENST00000359683 NARSO43776 548 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms