RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 C4orf50Q6ZRC1 276 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 SCUBE1Q8IWY4 988 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 ZNF398Q8TD17 642 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 AZIN2Q96A70 460 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 TRIM62Q9BVG3 475 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 ARHGEF3Q9NR81 526 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 PIGVQ9NUD9 493 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 ARHGEF38Q9NXL2 777 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 RUVBL2Q9Y230 463 aaKnown RBP11.45□□□□□ -0.58
SSU72-202ENST00000359060 CDY1Q9Y6F8 540 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 ZBTB24O43167 697 aaPredicted RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 TIMM44O43615 452 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 PFKMP08237 780 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 PDCD2Q16342 344 aaPredicted RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 UGP2Q16851 508 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 KYAT3Q6YP21 454 aaKnown RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 PIWIL2Q8TC59 973 aaKnown RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 URGCPQ8TCY9 931 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 FAM136AQ96C01 138 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 SPDL1Q96EA4 605 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 MFSD3Q96ES6 412 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 IFT43Q96FT9 208 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 SEPT5Q99719 369 aaPredicted RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 COLEC11Q9BWP8 271 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 SSU72Q9NP77 194 aaKnown RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 KCNK4Q9NYG8 393 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 TAGLN3Q9UI15 199 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 FZD10Q9ULW2 581 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 MCM3APO60318 1980 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 E7ESA3 106 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 BPGMP07738 259 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 COPAP53621 1224 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 CDH17Q12864 832 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 UBAP2LQ14157 1087 aaKnown RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 MGAT5BQ3V5L5 792 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 TNFAIP8L3Q5GJ75 292 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 SPANXN3Q5MJ09 141 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 KIAA1841Q6NSI8 718 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 CDHR3Q6ZTQ4 885 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 TMEM86AQ8N2M4 240 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 APBB2Q92870 758 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 CNGB3Q9NQW8 809 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 FETUBQ9UGM5 382 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 ANXA9O76027 345 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 F2P00734 622 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 ENO3P13929 434 aaPredicted RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 GRK2P25098 689 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 SERPINB5P36952 375 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 TUBP50607 506 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 YWHAHQ04917 246 aaPredicted RBP11.44□□□□□ -0.58
SSU72-202ENST00000359060 CCDC15Q0P6D6 951 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 EFEMP1Q12805 493 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 GRB14Q14449 540 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 CLEC20AQ6ZU45 233 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 LINC00523Q86TU6 105 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 C10orf107Q8IVU9 208 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 GBP5Q96PP8 586 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 CPNE1Q99829 537 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 ADAMTS10Q9H324 1103 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 CYP4F12Q9HCS2 524 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 MAN1C1Q9NR34 630 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 CNTN3Q9P232 1028 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 SFMBT1Q9UHJ3 866 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 SCOCQ9UIL1 159 aa11.44□□□□□ -0.58
SSU72-202ENST00000359060 MEIS3P2A8K0S8 358 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 NRP1O14786 923 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 BEST1O76090 585 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 CSPG5O95196 566 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 CCR1P32246 355 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 LDLRAD1Q5T700 205 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 MAP3K21Q5TCX8 1036 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 LRRC8BQ6P9F7 803 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 BBS5Q8N3I7 341 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 NAF1Q96HR8 494 aaKnown RBP11.43□□□□□ -0.58
SSU72-202ENST00000359060 ILKAPQ9H0C8 392 aaPredicted RBP11.43□□□□□ -0.58
SSU72-202ENST00000359060 NT5MQ9NPB1 228 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
SSU72-202ENST00000359060 MSI1O43347 362 aaKnown RBP11.43□□□□□ -0.58
SSU72-202ENST00000359060 DCXO43602 365 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 RIPK1Q13546 671 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 MAPRE1Q15691 268 aaKnown RBP11.43□□□□□ -0.58
SSU72-202ENST00000359060 EML3Q32P44 896 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 MARCH8Q5T0T0 291 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 GRTP1Q5TC63 336 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 CGB2Q6NT52 195 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 TRIM67Q6ZTA4 783 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
SSU72-202ENST00000359060 TMPRSS6Q8IU80 811 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 SIGLEC10Q96LC7 697 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 YIPF3Q9GZM5 350 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 CHRAC1Q9NRG0 131 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 CDH9Q9ULB4 789 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 AAR2Q9Y312 384 aaKnown RBP11.43□□□□□ -0.58
SSU72-202ENST00000359060 SKAP2O75563 359 aaPredicted RBP11.43□□□□□ -0.58
SSU72-202ENST00000359060 KRT36O76013 467 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 ZNF235Q14590 738 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 C10orf120Q5SQS8 335 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 WASHC2DQ5SRD0 308 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms