RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 USP45Q70EL2 814 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 FBXO16Q8IX29 292 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 PJA1Q8NG27 643 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 FAR1Q8WVX9 515 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 RNF145Q96MT1 663 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 SNCAIPQ9Y6H5 919 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 SSU72P8A0A1W2PR75 194 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 PTGES3LE9PB15 166 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 LIN7AO14910 233 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 EIF3HO15372 352 aaKnown RBP eCLIP9.04□□□□□ -0.962e-7■■□□□ 12
CTNND1-201ENST00000358694 TFPIP10646 304 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 EPORP19235 508 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 ACSM2AQ08AH3 577 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 ACSM2BQ68CK6 577 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 COLGALT1Q8NBJ5 622 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 C18orf25Q96B23 403 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 C7orf25Q9BPX7 421 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 FAIM2Q9BWQ8 316 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 ARL15Q9NXU5 204 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 PTGFRNQ9P2B2 879 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 FAM50BQ9Y247 325 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 URADA6NGE7 173 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 CD3EAPO15446 510 aaKnown RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 TPP2P29144 1249 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 CD151P48509 253 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 DGUOKQ16854 277 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 GJB7Q6PEY0 223 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 GRIN3AQ8TCU5 1115 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 MTA3Q9BTC8 594 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 TAS2R13Q9NYV9 303 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 NPHP4O75161 1426 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 PLEKP08567 350 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 TPH1P17752 444 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 CNTFP26441 200 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 S100A3P33764 101 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 C11orf63Q6NUN7 778 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 EIF3MQ7L2H7 374 aaKnown RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 DET1Q7L5Y6 550 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 EXOC3L1Q86VI1 746 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 OR10H5Q8NGA6 315 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 ZFP28Q8NHY6 868 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 MAGEE2Q8TD90 523 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 SEMA4DQ92854 862 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 NMD3Q96D46 503 aaKnown RBP9.04□□□□□ -0.96
CTNND1-201ENST00000358694 TNKS2Q9H2K2 1166 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 TAGLN3Q9UI15 199 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 HAO1Q9UJM8 370 aa9.04□□□□□ -0.96
CTNND1-201ENST00000358694 ITSN2Q9NZM3 1697 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 GRXCR2A6NFK2 248 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 BTN3A1O00481 513 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 SLC26A4O43511 780 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 TSPAN9O75954 239 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 FMO4P31512 558 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 FCHO2Q0JRZ9 810 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 MTA1Q13330 715 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 NEDD8Q15843 81 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 ARMC12Q5T9G4 340 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 MSANTD1Q6ZTZ1 278 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 OR5T3Q8NGG3 340 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 ZKSCAN4Q969J2 545 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-201ENST00000358694 TEKT5Q96M29 485 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 CHP1Q99653 195 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 INVSQ9Y283 1065 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 GCATO75600 419 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 CLPTM1O96005 669 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 SRGNP10124 158 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 CYP2F1P24903 491 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 CXCR2P25025 360 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 HTR1BP28222 390 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 HSD17B3P37058 310 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 TUBP50607 506 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 CHN2P52757 468 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 BST2Q10589 180 aaKnown RBP9.03□□□□□ -0.96
CTNND1-201ENST00000358694 TFDP3Q5H9I0 405 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 LLGL2Q6P1M3 1020 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 STK32CQ86UX6 486 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 ATCAYQ86WG3 371 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 DHFR2Q86XF0 187 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 OR10G6Q8NH81 332 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 NAT9Q9BTE0 207 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 TTLL2Q9BWV7 592 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 NMRAL1Q9HBL8 299 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 EHD3Q9NZN3 535 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 OPTCQ9UBM4 332 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 ZNF222Q9UK12 451 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 PLXNC1O60486 1568 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 A0A0B4J269 797 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 DCLK1O15075 740 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 ITPKBP27987 946 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 RGS1Q08116 209 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 RAET1GQ6H3X3 334 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 RBM43Q6ZSC3 357 aaKnown RBP9.03□□□□□ -0.96
CTNND1-201ENST00000358694 ZC3H7AQ8IWR0 971 aaKnown RBP9.03□□□□□ -0.96
CTNND1-201ENST00000358694 HAVCR1Q96D42 359 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 C1QTNF1Q9BXJ1 281 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 SHOC2Q9UQ13 582 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 USP27XA6NNY8 438 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 E7ENQ6 273 aa9.03□□□□□ -0.96
CTNND1-201ENST00000358694 TPD52L2O43399 206 aaKnown RBP9.03□□□□□ -0.96
CTNND1-201ENST00000358694 SGTAO43765 313 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms