RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 PLIN3O60664 434 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 PMPCBO75439 489 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 LUC7L3O95232 432 aaKnown RBP8.47□□□□□ -1.05
CD46-205ENST00000358170 POMCP01189 267 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 FAM200BP0CF97 657 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 SKIP12755 728 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 NPR3P17342 541 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 NFKB1P19838 968 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 PTPN9P43378 593 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 NR2C2P49116 596 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 CACNA2D1P54289 1103 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 WASHC5Q12768 1159 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 SEMA5AQ13591 1074 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 PCSK7Q16549 785 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 KYAT1Q16773 422 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 DUSP28Q4G0W2 176 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 SPDYAQ5MJ70 313 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 TEDDM1Q5T9Z0 273 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 RNF220Q5VTB9 566 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 FAM219BQ5XKK7 198 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 ATG14Q6ZNE5 492 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 DEFB107AQ8IZN7 70 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 ARNTL2Q8WYA1 636 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 KCNN1Q92952 543 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 CERS2Q96G23 380 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 MAML3Q96JK9 1138 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 ZNF560Q96MR9 790 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 ADAMTS10Q9H324 1103 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 TASP1Q9H6P5 420 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 EMCNQ9ULC0 261 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 PPM1HQ9ULR3 514 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 KCNH4Q9UQ05 1017 aa8.47□□□□□ -1.05
CD46-205ENST00000358170 LCTP09848 1927 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 DPYSL4O14531 572 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 PPP1R12AO14974 1030 aaPredicted RBP8.46□□□□□ -1.05
CD46-205ENST00000358170 TGDSO95455 350 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 MT-CYBP00156 380 aaPredicted RBP8.46□□□□□ -1.05
CD46-205ENST00000358170 CD4P01730 458 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 LTFP02788 710 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 SETSIPP0DME0 302 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 ARRB2P32121 409 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 CCNHP51946 323 aaPredicted RBP8.46□□□□□ -1.05
CD46-205ENST00000358170 POLE2P56282 527 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 ITKQ08881 620 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 CTBP1Q13363 440 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 SDCCAG8Q86SQ7 713 aaPredicted RBP8.46□□□□□ -1.05
CD46-205ENST00000358170 UNC93AQ86WB7 457 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 ZNF781Q8N8C0 355 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 SENP8Q96LD8 212 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 C7orf26Q96N11 449 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 PANX3Q96QZ0 392 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 FRMD8Q9BZ67 464 aaPredicted RBP8.46□□□□□ -1.05
CD46-205ENST00000358170 TKTL2Q9H0I9 626 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 WDCPQ9H6R7 721 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 PLEKHA5Q9HAU0 1116 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 DONSONQ9NYP3 566 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 MOCS1Q9NZB8 636 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 ZNF180Q9UJW8 692 aa8.46□□□□□ -1.05
CD46-205ENST00000358170 TK2O00142 265 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 GLRA3O75311 464 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 GPR32O75388 356 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 WFS1O76024 890 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 CHRNGP07510 517 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 FGF3P11487 239 aaPredicted RBP8.46□□□□□ -1.06
CD46-205ENST00000358170 TSHRP16473 764 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 YBX3P16989 372 aaKnown RBP eCLIP8.46□□□□□ -1.06
CD46-205ENST00000358170 PGAM1P18669 254 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 ATP6V1C1P21283 382 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 BDNFP23560 247 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 EPHA3P29320 983 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 ADRA1BP35368 520 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 FDFT1P37268 417 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 GARSP41250 739 aaKnown RBP8.46□□□□□ -1.06
CD46-205ENST00000358170 POU5F1BQ06416 359 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 BLMHQ13867 455 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 USP10Q14694 798 aaKnown RBP8.46□□□□□ -1.06
CD46-205ENST00000358170 ZRSR2Q15696 482 aaKnown RBP8.46□□□□□ -1.06
CD46-205ENST00000358170 RABGAP1LQ5R372 815 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 KIAA0319Q5VV43 1072 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 LPCAT4Q643R3 524 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 FSTL4Q6MZW2 842 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 CLEC20AQ6ZU45 233 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 TLK2Q86UE8 772 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 ZNF410Q86VK4 478 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 HPS6Q86YV9 775 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 KBTBD2Q8IY47 623 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 NPWQ8N729 165 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 SNX31Q8N9S9 440 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 SH3TC2Q8TF17 1288 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 BRI3BPQ8WY22 251 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 WNT8BQ93098 351 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 LRRC39Q96DD0 335 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 DUSP16Q9BY84 665 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 ABHD16BQ9H3Z7 469 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 PNPLA8Q9NP80 782 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 NDE1Q9NXR1 346 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 TLK1Q9UKI8 766 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 TTC3P53804 2025 aa8.46□□□□□ -1.06
CD46-205ENST00000358170 LAMA2P24043 3122 aaKnown RBP8.46□□□□□ -1.06
CD46-205ENST00000358170 I6L893 689 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms