RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 SPATA13Q96N96 652 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 CDX2Q99626 313 aaPredicted RBP14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 EBNA1BP2Q99848 306 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 SYT15Q9BQS2 421 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 CACNG4Q9UBN1 327 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 SYNJ2BP-COX16A0A087WUM0 186 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 WDR91A4D1P6 747 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 CXorf49A8MYA2 514 aaPredicted RBP14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 C9IYK1 514 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 TRIM49D1C9J1S8 452 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 E7ENQ6 273 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 COPEO14579 308 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 TLL1O43897 1013 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 FBXO21O94952 628 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 ARHGEF15O94989 841 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 ANP32DO95626 131 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 PYGBP11216 843 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 TARSP26639 723 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 PTPN4P29074 926 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 ELF1P32519 619 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 LHX1P48742 406 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 SERPINB9P50453 376 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 DEUP1Q05D60 604 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 CDK18Q07002 472 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 ANKRD20A2Q5SQ80 823 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 WASHC2DQ5SRD0 308 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 ANKRD20A1Q5TYW2 823 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 ANKRD20A3Q5VUR7 823 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 FAM91A1Q658Y4 838 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 DENND5BQ6ZUT9 1274 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 HFE2Q6ZVN8 426 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 CYS1Q717R9 158 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 CLNKQ7Z7G1 428 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 FAM35AQ86V20 835 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 CRIPAKQ8N1N5 446 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 GSTCDQ8NEC7 633 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 GSDMBQ8TAX9 411 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 RAB3IL1Q8TBN0 382 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 UTP4Q969X6 686 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 SLC7A6OSQ96CW6 309 aaPredicted RBP14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 STAMBPL1Q96FJ0 436 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 RSRC1Q96IZ7 334 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 GAD1Q99259 594 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 ZBED2Q9BTP6 218 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 IQCGQ9H095 443 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 NKX2-4Q9H2Z4 354 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 C12orf65Q9H3J6 166 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 CHST12Q9NRB3 414 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 SMYD2Q9NRG4 433 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 TMPRSS4Q9NRS4 437 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 COX16Q9P0S2 106 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 HAO1Q9UJM8 370 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 PCDHA11Q9Y5I1 949 aa14.68□□□□□ -0.06
NIPAL3-203ENST00000358028 SF3B1O75533 1304 aaKnown RBP eCLIP14.67□□□□□ -0.069e-6■■■■■ 87.9
NIPAL3-203ENST00000358028 ZNF638Q14966 1978 aaKnown RBP14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 HGSO14964 777 aaPredicted RBP14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 ZNF189O75820 626 aaPredicted RBP14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 KRT38O76015 456 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 STK10O94804 968 aaKnown RBP14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 THP07101 528 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 CA3P07451 260 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 SARNPP82979 210 aaKnown RBP14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 CDK16Q00536 496 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 TAF1BQ53T94 588 aaPredicted RBP14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 SYPL2Q5VXT5 272 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 DSTYKQ6XUX3 929 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 SLC24A5Q71RS6 500 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 MPP5Q8N3R9 675 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 TIFAQ96CG3 184 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 ULBP1Q9BZM6 244 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 MAD1L1Q9Y6D9 718 aa14.67□□□□□ -0.06
NIPAL3-203ENST00000358028 FAM159BA6NKW6 160 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 NRP1O14786 923 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 AP1G2O75843 785 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 CNTFP26441 200 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 SERPINB4P48594 390 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 GLUD2P49448 558 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 CLCNKBP51801 687 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 ARFIP2P53365 341 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 DAOAP59103 153 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 NME3Q13232 169 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 KRT72Q14CN4 511 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 PAFAH1B3Q15102 231 aaKnown RBP14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 RAB30Q15771 203 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 DBN1Q16643 649 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 CTC1Q2NKJ3 1217 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 SPRED2Q7Z698 418 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 MTDHQ86UE4 582 aaKnown RBP14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 COLGALT1Q8NBJ5 622 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 LPPQ93052 612 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 FAM111AQ96PZ2 611 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 LGMNQ99538 433 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 SMOQ99835 787 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 TBC1D10AQ9BXI6 508 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 PIGVQ9NUD9 493 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 MIOSQ9NXC5 875 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 KANSL3Q9P2N6 904 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 MSRAQ9UJ68 235 aa14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.66□□□□□ -0.06
NIPAL3-203ENST00000358028 TDRD15B5MCY1 1934 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms