RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 JAZF1Q86VZ6 243 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 SNRNP27Q8WVK2 155 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PLEKHA1Q9HB21 404 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 MRM3Q9HC36 420 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PIH1D1Q9NWS0 290 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 RCOR1Q9UKL0 485 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TMEM94Q12767 1356 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ABCA8O94911 1581 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 NPHP4O75161 1426 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 A8MUI8 341 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 O00370 1275 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 RNASEH2AO75792 299 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ANXA9O76027 345 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CYP1A2P05177 515 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ITIH2P19823 946 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PSMB9P28065 219 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 SPRP35270 261 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PGDP52209 483 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 DMWDQ09019 674 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CHI3L2Q15782 390 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 NDUFA5Q16718 116 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PROSER3Q2NL68 480 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 AGAP9Q5VTM2 703 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 NAPEPLDQ6IQ20 393 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 KCTD14Q9BQ13 255 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 DDX43Q9NXZ2 648 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 SNTG2Q9NY99 539 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 LCMT1Q9UIC8 334 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 RABGEF1Q9UJ41 708 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 A8MUA0 341 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 DNALI1O14645 258 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 KCNQ2O43526 872 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 HBP1O60381 514 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TBL1XO60907 577 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PDE9AO76083 593 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 APODP05090 189 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PIK3R1P27986 724 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TBX2Q13207 712 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 KHDC1LQ5JSQ8 128 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TTC33Q6PID6 262 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TMEM26Q6ZUK4 368 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ARMC8Q8IUR7 673 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TSEN15Q8WW01 171 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PHF21BQ96EK2 531 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 SEPHS2Q99611 448 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 SLC38A3Q99624 504 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 RNF26Q9BY78 433 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 MROH8Q9H579 483 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CLDND1Q9NY35 253 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 MTMR4Q9NYA4 1195 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CIDEBQ9UHD4 219 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PSMD13Q9UNM6 376 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 COG5Q9UP83 839 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 VPS9D1Q9Y2B5 631 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 A0A1W2PRG6 482 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ESYT3A0FGR9 886 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CACNB4O00305 520 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 TSPAN4O14817 238 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 KIAA0391O15091 583 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CD2BP2O95400 341 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CYB5AP00167 134 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ATP6V1B1P15313 513 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 VARSP26640 1264 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 IL12BP29460 328 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 HPCAL1P37235 193 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 SOX10P56693 466 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF200P98182 395 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 BNIP2Q12982 314 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 BNIP3Q12983 259 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 UBE3CQ15386 1083 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 DDR2Q16832 855 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 LONRF1Q17RB8 773 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 PDCD4Q53EL6 469 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 DENND1BQ6P3S1 775 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 SNX20Q7Z614 316 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 LONP2Q86WA8 852 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 DHX40Q8IX18 779 aaKnown RBP5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CHST4Q8NCG5 386 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 FNIP1Q8TF40 1166 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF558Q96NG5 402 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 SERPINB12Q96P63 405 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 IL12RB2Q99665 862 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 RIBC2Q9H4K1 309 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 CATSPERZQ9NTU4 200 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF222Q9UK12 451 aa5.91□□□□□ -1.46
BRCA1-203ENST00000357654 UTYO14607 1347 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 RPAP1Q9BWH6 1393 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 DDX3XO00571 662 aaKnown RBP eCLIP5.9□□□□□ -1.461e-8■■■□□ 17.6
BRCA1-203ENST00000357654 RPS6KA4O75676 772 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ALDH4A1P30038 563 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 CYP4F2P78329 520 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 TERF2Q15554 542 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 PRAMEF19Q5SWL8 479 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 C1orf94Q6P1W5 598 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 NEK5Q6P3R8 708 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ARHGEF19Q8IW93 802 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 CADM2Q8N3J6 435 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ADAM32Q8TC27 787 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 KLK6Q92876 244 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 MTA3Q9BTC8 594 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms