RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ZNF599Q96NL3 588 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 TWNKQ96RR1 684 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 EBF3Q9H4W6 596 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 PPARGC1AQ9UBK2 798 aaKnown RBP9.43□□□□□ -0.9
UPF2-202ENST00000357604 TANC1Q9C0D5 1861 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 GRXCR2A6NFK2 248 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 NEFHP12036 1026 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 BASP1P80723 227 aaKnown RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 TBX2Q13207 712 aaPredicted RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 ALG6Q9Y672 507 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 A0A087X0T9 212 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 ILVBLA1L0T0 632 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 YJEFN3A6XGL0 299 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 E7ENQ6 273 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 FAM228BP0C875 321 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 ATF6P18850 670 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 STIP1P31948 543 aaKnown RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 MRPS21P82921 87 aaKnown RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 SMTNL2Q2TAL5 461 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 C1orf220Q5T0J3 134 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 PM20D1Q6GTS8 502 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 FAM84AQ96KN4 292 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 ASB2Q96Q27 587 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 F8W810 466 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 CRTAMO95727 393 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 SERPINF2P08697 491 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 ATP5DP30049 168 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 ADRA1BP35368 520 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 LBRQ14739 615 aaKnown RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 SUZ12Q15022 739 aaKnown RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 AARS2Q5JTZ9 985 aaKnown RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 TEX35Q5T0J7 233 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 ARMC12Q5T9G4 340 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 IRF2BP2Q7Z5L9 587 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 DNAAF5Q86Y56 855 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
UPF2-202ENST00000357604 CXorf38Q8TB03 319 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 PBXIP1Q96AQ6 731 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 FRMD8Q9BZ67 464 aaPredicted RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 ZCCHC2Q9C0B9 1178 aaKnown RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 TMLHEQ9NVH6 421 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 SUSD2Q9UGT4 822 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 FGGP02679 453 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 PMLP29590 882 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 NUDT1P36639 197 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 APBA1Q02410 837 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 AUHQ13825 339 aaKnown RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 SMAD2Q15796 467 aaKnown RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 LRRTM3Q86VH5 581 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 TMEM173Q86WV6 379 aaPredicted RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 KLF16Q9BXK1 252 aaPredicted RBP9.42□□□□□ -0.9
UPF2-202ENST00000357604 HEMGNQ9BXL5 484 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 OSBPL8Q9BZF1 889 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 GPR63Q9BZJ6 419 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 GPATCH2LQ9NWQ4 482 aa9.42□□□□□ -0.9
UPF2-202ENST00000357604 MYH11P35749 1972 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 PJA2O43164 708 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 KELP23276 732 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 PSMD8P48556 350 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 ECT2LQ008S8 904 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 MBLAC2Q68D91 279 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 SLC35F6Q8N357 371 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 NIPA2Q8N8Q9 360 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 RTL3Q8N8U3 475 aaKnown RBP9.41□□□□□ -0.9
UPF2-202ENST00000357604 USP33Q8TEY7 942 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 RC3H2Q9HBD1 1191 aaKnown RBP9.41□□□□□ -0.9
UPF2-202ENST00000357604 ARHGAP20Q9P2F6 1191 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 SIT1Q9Y3P8 196 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 TMEM191CA6NGB0 347 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 C2CD4BA6NLJ0 364 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 C2CD4DB7Z1M9 353 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 TRDMT1O14717 391 aaKnown RBP9.41□□□□□ -0.9
UPF2-202ENST00000357604 KLF8O95600 359 aaPredicted RBP9.41□□□□□ -0.9
UPF2-202ENST00000357604 ASMTLO95671 621 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 APBB3O95704 486 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 SLC4A1P02730 911 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 TIE1P35590 1138 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 EIF2DP41214 584 aaKnown RBP9.41□□□□□ -0.9
UPF2-202ENST00000357604 PAPOLAP51003 745 aaKnown RBP9.41□□□□□ -0.9
UPF2-202ENST00000357604 PON2Q15165 354 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 RAB41Q5JT25 222 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 GAS2L3Q86XJ1 694 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 CHP1Q99653 195 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 ZNF334Q9HCZ1 680 aaPredicted RBP9.41□□□□□ -0.9
UPF2-202ENST00000357604 NCDNQ9UBB6 729 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 WNT16Q9UBV4 365 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 ARID2Q68CP9 1835 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 H3BM21 787 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 AKT2P31751 481 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 PBX1P40424 430 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 DGKEP52429 567 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 SNX1Q13596 522 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 GPNMBQ14956 572 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 TMEM31Q5JXX7 168 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 UBR7Q8N806 425 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 IQCGQ9H095 443 aaKnown RBP9.41□□□□□ -0.9
UPF2-202ENST00000357604 HCFC1R1Q9NWW0 138 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 LCTP09848 1927 aa9.41□□□□□ -0.9
UPF2-202ENST00000357604 C2orf78A6NCI8 922 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms