RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ADH5P11766 374 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 TYRP14679 529 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 DYNLT1P63172 113 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 RUNX3Q13761 415 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 TFDP3Q5H9I0 405 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 IER5LQ5T953 404 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 RFX6Q8HWS3 928 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 TP53INP2Q8IXH6 220 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 NPWQ8N729 165 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 NAT16Q8N8M0 369 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 NXPE3Q969Y0 559 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 MS4A14Q96JA4 679 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 OSBPL8Q9BZF1 889 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 SMARCAL1Q9NZC9 954 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 MARK1Q9P0L2 795 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 KIAA1549LQ6ZVL6 1849 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 TRIM24O15164 1050 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 RHOQP17081 205 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 FSCBQ5H9T9 825 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 RNF43Q68DV7 783 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 NCBP2-AS2Q69YL0 99 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 CARNMT1Q8N4J0 409 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 RTL3Q8N8U3 475 aaKnown RBP26.12■■□□□ 1.77
SSBP3-202ENST00000357475 UBE2Q2Q8WVN8 375 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 KLC2Q9H0B6 622 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 TMEM248Q9NWD8 314 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 TRIOO75962 3097 aa26.12■■□□□ 1.77
SSBP3-202ENST00000357475 NYNRINQ9P2P1 1898 aaKnown RBP26.11■■□□□ 1.77
SSBP3-202ENST00000357475 A0A1B0GVM2 712 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 TCAF2A6NFQ2 919 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 CEP104O60308 925 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 CYBBP04839 570 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 SOX9P48436 509 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 COPS2P61201 443 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 PPP2R5EQ16537 467 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 ASTLQ6HA08 431 aaPredicted RBP26.11■■□□□ 1.77
SSBP3-202ENST00000357475 CXorf57Q6NSI4 855 aaKnown RBP26.11■■□□□ 1.77
SSBP3-202ENST00000357475 CCDC33Q8N5R6 958 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 PLD5Q8N7P1 536 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 NOL6Q9H6R4 1146 aaKnown RBP26.11■■□□□ 1.77
SSBP3-202ENST00000357475 CHD5Q8TDI0 1954 aa26.11■■□□□ 1.77
SSBP3-202ENST00000357475 ZNF487B1APH4 448 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 FGF10O15520 208 aaPredicted RBP26.1■■□□□ 1.77
SSBP3-202ENST00000357475 HOXC11O43248 304 aaPredicted RBP26.1■■□□□ 1.77
SSBP3-202ENST00000357475 LUC7L3O95232 432 aaKnown RBP26.1■■□□□ 1.77
SSBP3-202ENST00000357475 MAP3K6O95382 1288 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 ADH1CP00326 375 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 HTR7P34969 479 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 PTPN7P35236 360 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 ZNF135P52742 658 aaPredicted RBP26.1■■□□□ 1.77
SSBP3-202ENST00000357475 CDH4P55283 916 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 TTC39BQ5VTQ0 682 aaPredicted RBP26.1■■□□□ 1.77
SSBP3-202ENST00000357475 NPNTQ6UXI9 565 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 ADAT2Q7Z6V5 191 aaKnown RBP26.1■■□□□ 1.77
SSBP3-202ENST00000357475 VSIG1Q86XK7 387 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 NECAB3Q96P71 396 aaPredicted RBP26.1■■□□□ 1.77
SSBP3-202ENST00000357475 CATSPERBQ9H7T0 1116 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 CD320Q9NPF0 282 aa26.1■■□□□ 1.77
SSBP3-202ENST00000357475 SAE1Q9UBE0 346 aaPredicted RBP26.1■■□□□ 1.77
SSBP3-202ENST00000357475 WASH4PA8MWX3 477 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 CST8O60676 142 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 SLC6A11P48066 632 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 MESP2Q0VG99 397 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 TDGQ13569 410 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 MPP7Q5T2T1 576 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 SEL1L2Q5TEA6 688 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 SLC9A4Q6AI14 798 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 CHST9Q7L1S5 443 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 CPA6Q8N4T0 437 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 CELF6Q96J87 481 aaKnown RBP26.09■■□□□ 1.77
SSBP3-202ENST00000357475 MFSD11O43934 449 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 CLDN11O75508 207 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 OR1E1P30953 314 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 GJA4P35212 333 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 GBE1Q04446 702 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 GAD2Q05329 585 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 SLC10A2Q12908 348 aaPredicted RBP26.09■■□□□ 1.77
SSBP3-202ENST00000357475 ITPRIPL2Q3MIP1 535 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 C1orf228Q6PIY5 440 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 MFN1Q8IWA4 741 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 HAUS1Q96CS2 278 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 MAK16Q9BXY0 300 aaKnown RBP26.09■■□□□ 1.77
SSBP3-202ENST00000357475 SAR1BQ9Y6B6 198 aa26.09■■□□□ 1.77
SSBP3-202ENST00000357475 TYW5A2RUC4 315 aaKnown RBP26.08■■□□□ 1.77
SSBP3-202ENST00000357475 H0Y626 953 aa26.08■■□□□ 1.77
SSBP3-202ENST00000357475 PECAM1P16284 738 aaPredicted RBP26.08■■□□□ 1.77
SSBP3-202ENST00000357475 KLF1Q13351 362 aaPredicted RBP26.08■■□□□ 1.77
SSBP3-202ENST00000357475 TMCO3Q6UWJ1 677 aa26.08■■□□□ 1.77
SSBP3-202ENST00000357475 SLC13A5Q86YT5 568 aaPredicted RBP26.08■■□□□ 1.77
SSBP3-202ENST00000357475 ETFBKMTQ8IXQ9 262 aa26.08■■□□□ 1.77
SSBP3-202ENST00000357475 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.08■■□□□ 1.77
SSBP3-202ENST00000357475 LRRN4Q8WUT4 740 aa26.08■■□□□ 1.77
SSBP3-202ENST00000357475 PBKQ96KB5 322 aa26.08■■□□□ 1.77
SSBP3-202ENST00000357475 CAPZA3Q96KX2 299 aa26.08■■□□□ 1.77
SSBP3-202ENST00000357475 FAM118BQ9BPY3 351 aa26.08■■□□□ 1.77
SSBP3-202ENST00000357475 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.07■■□□□ 1.76
SSBP3-202ENST00000357475 KIF2AO00139 706 aaPredicted RBP26.07■■□□□ 1.76
SSBP3-202ENST00000357475 APOL1O14791 398 aa26.07■■□□□ 1.76
SSBP3-202ENST00000357475 CACNG3O60359 315 aa26.07■■□□□ 1.76
SSBP3-202ENST00000357475 PRLRP16471 622 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms