RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CSHL1Q14406 222 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 PYDC2Q56P42 97 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 INTS11Q5TA45 600 aaKnown RBP13.09□□□□□ -0.31
SMC4-202ENST00000357388 FAM126BQ8IXS8 530 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 SAMD3Q8N6K7 520 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 EMC1Q8N766 993 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 BLOC1S5Q8TDH9 187 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 TATDN2Q93075 761 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 THG1LQ9NWX6 298 aaKnown RBP13.09□□□□□ -0.31
SMC4-202ENST00000357388 ARHGEF5Q12774 1597 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 C2CD2LO14523 706 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 LSM1O15116 133 aaKnown RBP13.09□□□□□ -0.31
SMC4-202ENST00000357388 GLI1P08151 1106 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 TSHRP16473 764 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 CASP5P51878 434 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 PTSQ03393 145 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 CDC42EP5Q6NZY7 148 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 EPB41L1Q9H4G0 881 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 CLK4Q9HAZ1 481 aaKnown RBP13.09□□□□□ -0.31
SMC4-202ENST00000357388 NMRK2Q9NPI5 230 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 SAGE2PA6NJ88 616 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 PLD1Q13393 1074 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 FAM187BQ17R55 369 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 RBM44Q6ZP01 1051 aaKnown RBP13.09□□□□□ -0.31
SMC4-202ENST00000357388 PSMA8Q8TAA3 256 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 GRPEL2Q8TAA5 225 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 CKAP2Q8WWK9 683 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 DCLK3Q9C098 648 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 DMGDHQ9UI17 866 aaKnown RBP13.09□□□□□ -0.31
SMC4-202ENST00000357388 RPS6KA6Q9UK32 745 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 IRGMA1A4Y4 181 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 FBXO21O94952 628 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 ACADLP28330 430 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 AKIRIN2Q53H80 203 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 TNFAIP8L3Q5GJ75 292 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 DPF3Q92784 378 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 COX4I2Q96KJ9 171 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 CCDC3Q9BQI4 270 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 MROH8Q9H579 483 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 PDGFCQ9NRA1 345 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 ZNF221Q9UK13 617 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 GRAP2O75791 330 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 GTF2E2P29084 291 aaKnown RBP13.09□□□□□ -0.31
SMC4-202ENST00000357388 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 MAGEC3Q8TD91 643 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 DEFB129Q9H1M3 183 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 ACTR8Q9H981 624 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 UBP1Q9NZI7 540 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 PLA2G4CQ9UP65 541 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 CARNS1A5YM72 827 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 DHFRP00374 187 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 ANPEPP15144 967 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 C16orf86Q6ZW13 317 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 SLC9A7Q96T83 725 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 S100A13Q99584 98 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 NLNQ9BYT8 704 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 SEMA4AQ9H3S1 761 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 DPP3Q9NY33 737 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 PSMD12O00232 456 aaPredicted RBP13.08□□□□□ -0.32
SMC4-202ENST00000357388 RGS14O43566 566 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 HPCAL1P37235 193 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 HSF2Q03933 536 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 SQLEQ14534 574 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 PERM1Q5SV97 790 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 FAXCQ5TGI0 409 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 IGDCC4Q8TDY8 1250 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 CAPN10Q9HC96 672 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 DDIT4Q9NX09 232 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 VPS51Q9UID3 782 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 VANGL2Q9ULK5 521 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 LAMC1P11047 1609 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 MATN2O00339 956 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 TRIM38O00635 465 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 TMCC2O75069 709 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 CCNIQ14094 377 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 PLCL1Q15111 1095 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 CWF19L1Q69YN2 538 aaKnown RBP13.08□□□□□ -0.32
SMC4-202ENST00000357388 PROSER1Q86XN7 944 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.08□□□□□ -0.325e-13■■■■■ 220.5
SMC4-202ENST00000357388 SPIRE2Q8WWL2 714 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
SMC4-202ENST00000357388 AGPAT3Q9NRZ7 376 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 NINJ2Q9NZG7 142 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 BAIAP2Q9UQB8 552 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 ARHGEF40Q8TER5 1519 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 OR6B1O95007 311 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 KCNH1O95259 989 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 ZNF24P17028 368 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 SMIM11AP58511 58 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 MYL6P60660 151 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 ZNF280DQ6N043 979 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 STOX1Q6ZVD7 989 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 SLFN11Q7Z7L1 901 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 FNDC5Q8NAU1 212 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms