RNA–Protein interactions for RNA: ENST00000356942.9

GPM6B-203, Transcript of glycoprotein M6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPM6B, Length 1,830 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-203ENST00000356942 XRCC4Q13426 336 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 CCDC85BQ15834 202 aaPredicted RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 MPPE1Q53F39 396 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 MPP7Q5T2T1 576 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 OTOP3Q7RTS5 596 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 UMODL1-AS1Q8N2C9 162 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 NPWQ8N729 165 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 RSPRY1Q96DX4 576 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 OLFM3Q96PB7 478 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 KLC2Q9H0B6 622 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 DDX47Q9H0S4 455 aaKnown RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 ZFP14Q9HCL3 533 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 SAE1Q9UBE0 346 aaPredicted RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 ZNF212Q9UDV6 495 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 GRXCR2A6NFK2 248 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 HEPACAM2A8MVW5 462 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 EFCAB8A8MWE9 144 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 HACD1B0YJ81 288 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 TRDMT1O14717 391 aaKnown RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 PPP1R12AO14974 1030 aaPredicted RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 TSPAN3O60637 253 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 CNTN5O94779 1100 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 LAMP2P13473 410 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 MX2P20592 715 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 COILP38432 576 aaPredicted RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 VIPR2P41587 438 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 SGSHP51688 502 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 NDST2P52849 883 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 RPS24P62847 133 aaKnown RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 BYSLQ13895 437 aaKnown RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 AFMIDQ63HM1 303 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 TFAP2DQ7Z6R9 452 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 CIR1Q86X95 450 aaPredicted RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 CDKL3Q8IVW4 592 aaPredicted RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 KLHL7Q8IXQ5 586 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 CFAP52Q8N1V2 620 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 LRRN4CLQ8ND94 238 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 GRK7Q8WTQ7 553 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 OSCP1Q8WVF1 389 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 TMA16Q96EY4 203 aaKnown RBP13.2□□□□□ -0.3
GPM6B-203ENST00000356942 KRT12Q99456 494 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 EPS15L1Q9UBC2 864 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 PCYOX1Q9UHG3 505 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 DNPEPQ9ULA0 475 aa13.2□□□□□ -0.3
GPM6B-203ENST00000356942 NYNRINQ9P2P1 1898 aaKnown RBP13.19□□□□□ -0.3
GPM6B-203ENST00000356942 MBTPS2O43462 519 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 TBL1XO60907 577 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 IFNAR2P48551 515 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 LMNB2Q03252 620 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 GALNT2Q10471 571 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 SLC10A2Q12908 348 aaPredicted RBP13.19□□□□□ -0.3
GPM6B-203ENST00000356942 SNX1Q13596 522 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 DHX34Q14147 1143 aaKnown RBP13.19□□□□□ -0.3
GPM6B-203ENST00000356942 PDK1Q15118 436 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 OASLQ15646 514 aaKnown RBP13.19□□□□□ -0.3
GPM6B-203ENST00000356942 C6orf118Q5T5N4 469 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 RNF43Q68DV7 783 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 TTC27Q6P3X3 843 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 CCDC137Q6PK04 289 aaKnown RBP13.19□□□□□ -0.3
GPM6B-203ENST00000356942 MTSS1LQ765P7 747 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 NOA1Q8NC60 698 aaKnown RBP13.19□□□□□ -0.3
GPM6B-203ENST00000356942 SLCO2A1Q92959 643 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 HLA-CQ95604 372 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 QKIQ96PU8 341 aaKnown RBP eCLIP13.19□□□□□ -0.3
GPM6B-203ENST00000356942 FAM118BQ9BPY3 351 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 BRD8Q9H0E9 1235 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 THG1LQ9NWX6 298 aaKnown RBP13.19□□□□□ -0.3
GPM6B-203ENST00000356942 WNT6Q9Y6F9 365 aa13.19□□□□□ -0.3
GPM6B-203ENST00000356942 CFAP69A5D8W1 941 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 LUC7L3O95232 432 aaKnown RBP13.18□□□□□ -0.3
GPM6B-203ENST00000356942 ITGAVP06756 1048 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 RBP3P10745 1247 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 OR1E1P30953 314 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 YBEYP58557 167 aaPredicted RBP13.18□□□□□ -0.3
GPM6B-203ENST00000356942 PDGFRLQ15198 375 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 PARP15Q460N3 678 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 SLC45A4Q5BKX6 768 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 TANGO2Q6ICL3 276 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 C8orf74Q6P047 294 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 SETD3Q86TU7 594 aaPredicted RBP13.18□□□□□ -0.3
GPM6B-203ENST00000356942 LRRC49Q8IUZ0 686 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 ARHGAP12Q8IWW6 846 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 CCDC105Q8IYK2 499 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 CCDC26Q8TAB7 109 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 DDI1Q8WTU0 396 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 DEPDC1BQ8WUY9 529 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 HDAC11Q96DB2 347 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 CCDC114Q96M63 670 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 LRRC3BQ96PB8 259 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 NDFIP2Q9NV92 336 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 DUS2Q9NX74 493 aaKnown RBP13.18□□□□□ -0.3
GPM6B-203ENST00000356942 MARK1Q9P0L2 795 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 FEZ2Q9UHY8 353 aaPredicted RBP13.18□□□□□ -0.3
GPM6B-203ENST00000356942 DRG1Q9Y295 367 aaKnown RBP13.18□□□□□ -0.3
GPM6B-203ENST00000356942 NUP205Q92621 2012 aa13.18□□□□□ -0.3
GPM6B-203ENST00000356942 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.18□□□□□ -0.3
GPM6B-203ENST00000356942 BCLAF3A2AJT9 711 aaKnown RBP13.18□□□□□ -0.3
GPM6B-203ENST00000356942 H7C0C1 242 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms