RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 FBXO33Q7Z6M2 555 aa5.65□□□□□ -1.51
PTPRD-202ENST00000356435 FAM228AQ86W67 206 aa5.65□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF786Q8N393 782 aa5.65□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF248Q8NDW4 579 aa5.65□□□□□ -1.51
PTPRD-202ENST00000356435 ATL1Q8WXF7 558 aa5.65□□□□□ -1.51
PTPRD-202ENST00000356435 TATDN2Q93075 761 aa5.65□□□□□ -1.51
PTPRD-202ENST00000356435 NACC2Q96BF6 587 aa5.65□□□□□ -1.51
PTPRD-202ENST00000356435 CLEC4MQ9H2X3 399 aaPredicted RBP5.65□□□□□ -1.51
PTPRD-202ENST00000356435 GDF3Q9NR23 364 aa5.65□□□□□ -1.51
PTPRD-202ENST00000356435 hCG_2014768A0A024R1R8 64 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CENPXA8MT69 81 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 AP3D1O14617 1153 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 KPNA5O15131 536 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FOXN1O15353 648 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PPM1AP35813 382 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 NPTX2P47972 431 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CD151P48509 253 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CSHL1Q14406 222 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ADRM1Q16186 407 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 DDR2Q16832 855 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 LRRC36Q1X8D7 754 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF618Q5T7W0 954 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PRR23CQ6ZRP0 262 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 USP50Q70EL3 339 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 RNF44Q7L0R7 432 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 KRT74Q7RTS7 529 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 NECAB2Q7Z6G3 386 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 KIFC1Q9BW19 673 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 RERGLQ9H628 205 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 EFCAB1Q9HAE3 211 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 BARX2Q9UMQ3 279 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 C15orf41Q9Y2V0 281 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SH3GLB1Q9Y371 365 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 OR10H1Q9Y4A9 318 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 UBDO15205 165 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ADH1CP00326 375 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ASGR1P07306 291 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ITGAXP20702 1163 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ATP12AP54707 1039 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 NME5P56597 212 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 NR6A1Q15406 480 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 USP41Q3LFD5 358 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ERMARDQ5T6L9 678 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PTAR1Q7Z6K3 402 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 LRRC6Q86X45 466 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PIK3R5Q8WYR1 880 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SHCBP1LQ9BZQ2 653 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SPRTNQ9H040 489 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 GNPTGQ9UJJ9 305 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MAPRE3Q9UPY8 281 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 H3BRB1 525 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FGF10O15520 208 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 LBPP18428 481 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TFE3P19532 575 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 BMP6P22004 513 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 DGKAP23743 735 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SKIV2L2P42285 1042 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 GLRBP48167 497 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TUBP50607 506 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ADIGQ0VDE8 80 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ITGADQ13349 1161 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 RSBN1Q5VWQ0 802 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TYW3Q6IPR3 259 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 LLGL2Q6P1M3 1020 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 BRSK2Q8IWQ3 736 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CACTIN-AS1Q8N1I8 211 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FBXO39Q8N4B4 442 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 GRIN3AQ8TCU5 1115 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FIG4Q92562 907 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FAM111AQ96PZ2 611 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TUT1Q9H6E5 874 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 AGO4Q9HCK5 861 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CORO2BQ9UQ03 480 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MST1RQ04912 1400 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CRYBG1Q9Y4K1 1723 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MAGEC1O60732 1142 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FAM20BO75063 409 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TGFB3P10600 412 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TPP2P29144 1249 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 HOXC12P31275 282 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 RAD23AP54725 363 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FAM98BQ52LJ0 330 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TRIQKQ629K1 86 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SLC13A5Q86YT5 568 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SIKE1Q9BRV8 207 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PIGUQ9H490 435 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MRTO4Q9UKD2 239 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PIPSLA2A3N6 862 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ZBTB14O43829 449 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PLEKP08567 350 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 COX7A2P14406 83 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CYP11B1P15538 503 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ADORA2AP29274 412 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CRABP2P29373 138 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 HERVK_113P62684 666 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MGAT5Q09328 741 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PGM5Q15124 567 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SPOCD1Q6ZMY3 1216 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MCEMP1Q8IX19 187 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms