RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 SNX5Q9Y5X3 404 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 LAMA4Q16363 1823 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 A0A087X0B3 334 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 FAM205CA6NFA0 338 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 LINC00587B1AMM8 73 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 FAM25AB3EWG3 89 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 FAM25CB3EWG5 89 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 FAM25GB3EWG6 89 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 H0YIN7 160 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 H6PDO95479 791 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 PGK2P07205 417 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 MYL2P10916 166 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 CYP19A1P11511 503 aaPredicted RBP9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 PTPREP23469 700 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 MAPK12P53778 367 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 PRKAA2P54646 552 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 TBX4P57082 545 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 ERVK-21P61565 698 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 CDKL1Q00532 357 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 ZNF174Q15697 407 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 NAB2Q15742 525 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 GEN1Q17RS7 908 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 EARS2Q5JPH6 523 aaKnown RBP9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 POMZP3Q6PJE2 187 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 PRPF39Q86UA1 669 aaKnown RBP9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 STX12Q86Y82 276 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 DAGLBQ8NCG7 672 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 TRIM43Q96BQ3 446 aaPredicted RBP9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 PAWRQ96IZ0 340 aaKnown RBP9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 C19orf43Q9BQ61 176 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 TXLNGYQ9BZA5 131 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 BCL2L14Q9BZR8 327 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 C17orf75Q9HAS0 396 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 ZDHHC18Q9NUE0 388 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 PIH1D1Q9NWS0 290 aaKnown RBP9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 SIRPGQ9P1W8 387 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 CACNG2Q9Y698 323 aa9.13□□□□□ -0.95
RBFOX1-203ENST00000355637 PDZK1P1A8MUH7 402 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 H3BNX3 289 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 SYN3O14994 580 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 KPNA5O15131 536 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 DEAF1O75398 565 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 APOA4P06727 396 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 GARTP22102 1010 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 AXLP30530 894 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 SHMT1P34896 483 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 RPL21P46778 160 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 GDI2P50395 445 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 C1QBPQ07021 282 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 SIM2Q14190 667 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 RRP1BQ14684 758 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 CDK10Q15131 360 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 PCBP1Q15365 356 aaKnown RBP eCLIP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 DNAL1Q4LDG9 190 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 TOR2AQ5JU69 321 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 TRAPPC3LQ5T215 181 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 ATG16L1Q676U5 607 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 MFSD5Q6N075 450 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 EEPD1Q7L9B9 569 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 CCDC105Q8IYK2 499 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 OR2T3Q8NH03 318 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 TRPM4Q8TD43 1214 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 GTF2H4Q92759 462 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 GAS2L1Q99501 681 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 GCOM2Q9BZD3 368 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 SYNDIG1Q9H7V2 258 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 LIN7BQ9HAP6 207 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 HMG20AQ9NP66 347 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 ZNF224Q9NZL3 707 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 RAB26Q9ULW5 256 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 V9GY48 417 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 TNKSO95271 1327 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 CYP2D7A0A087X1C5 515 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 A0A1W2PRG6 482 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 GRXCR2A6NFK2 248 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 RFPL2O75678 378 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 ALDH1A2O94788 518 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 KITP10721 976 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 NPR1P16066 1061 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 CCNA2P20248 432 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 EEF1GP26641 437 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 RPA3P35244 121 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 RPS6P62753 249 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 TNFAIP2Q03169 654 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 GPR68Q15743 365 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 ZBED5Q49AG3 693 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 FBXO43Q4G163 708 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 RALGPS1Q5JS13 557 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 CACHD1Q5VU97 1274 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 SUSD4Q5VX71 490 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 NECAB2Q7Z6G3 386 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 SLC44A2Q8IWA5 706 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 MICU2Q8IYU8 434 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 LRRC47Q8N1G4 583 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 POC5Q8NA72 575 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 ZNF579Q8NAF0 562 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 DENND1AQ8TEH3 1009 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 SYMPKQ92797 1274 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 TESCQ96BS2 214 aa9.12□□□□□ -0.95
RBFOX1-203ENST00000355637 HDAC11Q96DB2 347 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms