RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 HCFC2Q9Y5Z7 792 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 CPQQ9Y646 472 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 ATG2AQ2TAZ0 1938 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 NUP205Q92621 2012 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 C5orf60A6NFR6 353 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 DRGXA6NNA5 263 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 XYLBO75191 536 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 GCATO75600 419 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 STK10O94804 968 aaKnown RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 FGF19O95750 216 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 KLKB1P03952 638 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 CKMP06732 381 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 GJA1P17302 382 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 HSPA9P38646 679 aaKnown RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 IRAK1P51617 712 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 EPHA5P54756 1037 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 BASP1P80723 227 aaKnown RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 SMAD3P84022 425 aaKnown RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 DHX9Q08211 1270 aaKnown RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 MORF4L2Q15014 288 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 ALFQ53S48 1182 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 FAM133BQ5BKY9 247 aaKnown RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 MTERF4Q7Z6M4 381 aaKnown RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 LGI2Q8N0V4 545 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 TAB3Q8N5C8 712 aaPredicted RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 ZFRQ96KR1 1074 aaKnown RBP14□□□□□ -0.17
HOXA1-202ENST00000355633 NDFIP2Q9NV92 336 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 ZDHHC7Q9NXF8 308 aa14□□□□□ -0.17
HOXA1-202ENST00000355633 DFFAO00273 331 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 CNTN5O94779 1100 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 PFKLP17858 780 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 SLC6A4P31645 630 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 FAM182AQ5T1J6 154 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 TFAP2DQ7Z6R9 452 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 ARHGAP12Q8IWW6 846 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 PPIL6Q8IXY8 311 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 TSEN2Q8NCE0 465 aaKnown RBP13.99□□□□□ -0.17
HOXA1-202ENST00000355633 DEPDC1BQ8WUY9 529 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 SLC39A8Q9C0K1 460 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 TSPYL1Q9H0U9 437 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 TLE6Q9H808 572 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 SEPT10Q9P0V9 454 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 DNMT3BQ9UBC3 853 aaKnown RBP13.99□□□□□ -0.17
HOXA1-202ENST00000355633 AGO1Q9UL18 857 aaKnown RBP13.99□□□□□ -0.17
HOXA1-202ENST00000355633 SHOC2Q9UQ13 582 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 ATP8A1Q9Y2Q0 1164 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
HOXA1-202ENST00000355633 MYO7AQ13402 2215 aa13.99□□□□□ -0.17
HOXA1-202ENST00000355633 A0A0A0MRY4 1105 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 TRAV19A0A0A6YYK7 116 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 MTSS1O43312 755 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 PPFIA2O75334 1257 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 RHOP08100 348 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 CHKAP35790 457 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 CCR2P41597 374 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 ZNF33AQ06730 810 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 ANKRD20A2Q5SQ80 823 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 ZNF697Q5TEC3 545 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 ANKRD20A1Q5TYW2 823 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 ANKRD20A3Q5VUR7 823 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 RFWD3Q6PCD5 774 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 CCDC25Q86WR0 208 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 LEMD2Q8NC56 503 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 CPT1BQ92523 772 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 WBP2Q969T9 261 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 SPATA13Q96N96 652 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 DDX50Q9BQ39 737 aaKnown RBP13.98□□□□□ -0.17
HOXA1-202ENST00000355633 VIPAS39Q9H9C1 493 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 RAB6BQ9NRW1 208 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 PRDM4Q9UKN5 801 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 HPCAL4Q9UM19 191 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 SHROOM3Q8TF72 1996 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 RNF103O00237 685 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 NRG2O14511 850 aaPredicted RBP13.98□□□□□ -0.17
HOXA1-202ENST00000355633 LATS1O95835 1130 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 BMP8BP34820 402 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 NDST2P52849 883 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 SLC7A9P82251 487 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 SLMAPQ14BN4 828 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 C5orf22Q49AR2 442 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 RABGAP1LQ5R372 815 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 STXBP5Q5T5C0 1151 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 ADGRF1Q5T601 910 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 AFMIDQ63HM1 303 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 ARHGEF18Q6ZSZ5 1173 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 HOOK3Q86VS8 718 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 CIR1Q86X95 450 aaPredicted RBP13.98□□□□□ -0.17
HOXA1-202ENST00000355633 CCDC13Q8IYE1 715 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 UMODL1-AS1Q8N2C9 162 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 ATPAF2Q8N5M1 289 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 NAT8LQ8N9F0 302 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 SHKBP1Q8TBC3 707 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 ADAMTS19Q8TE59 1207 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 PRCCQ92733 491 aaPredicted RBP13.98□□□□□ -0.17
HOXA1-202ENST00000355633 MYEOVQ96EZ4 313 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 TXLNGYQ9BZA5 131 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 PRKD2Q9BZL6 878 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 FOXP3Q9BZS1 431 aa13.98□□□□□ -0.17
HOXA1-202ENST00000355633 CCDC195A0A1B0GUA6 201 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms