RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 NDUFS2O75306 463 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 CNTN5O94779 1100 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 SERPINF2P08697 491 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 ATP1A3P13637 1013 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 PDGFRAP16234 1089 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 NOS2P35228 1153 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 MATKP42679 507 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 SULT1E1P49888 294 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 AUHQ13825 339 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 SYCP1Q15431 976 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 DUOXA1Q1HG43 343 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 ALFQ53S48 1182 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 DCAF12L1Q5VU92 463 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 NAA35Q5VZE5 725 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 BNIPLQ7Z465 357 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 TMEM35BQ8NCS4 154 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 DEFB124Q8NES8 71 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 C1orf216Q8TAB5 229 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 DNASE2BQ8WZ79 361 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 NT5C3BQ969T7 300 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 DDX50Q9BQ39 737 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 ORAI3Q9BRQ5 295 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 NUSAP1Q9BXS6 441 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 MAGEB5Q9BZ81 275 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 LIMA1Q9UHB6 759 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 TMEM59LQ9UK28 342 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 SLC6A14Q9UN76 642 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 PLA2G4CQ9UP65 541 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 ITIH6Q6UXX5 1313 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 METTL12A8MUP2 240 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 ZBTB24O43167 697 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 CYP1A1P04798 512 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 ATP5BP06576 529 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 PMLP29590 882 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 CCR1P32246 355 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 PTP4A2Q12974 167 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 HNRNPA1L2Q32P51 320 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 C9orf64Q5T6V5 341 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 FAM102AQ5T9C2 384 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 SH3PXD2AQ5TCZ1 1133 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 RGL4Q8IZJ4 473 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 ZCCHC9Q8N567 271 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 EMC1Q8N766 993 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 PTPRN2Q92932 1015 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 C18orf8Q96DM3 657 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 FAM129BQ96TA1 746 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 TRIM62Q9BVG3 475 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 GTPBP2Q9BX10 602 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 SIK2Q9H0K1 926 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 RSPH9Q9H1X1 276 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 ARHGEF38Q9NXL2 777 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 EIF2B4Q9UI10 523 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 OR51B4Q9Y5P0 310 aa17.26■□□□□ 0.35
PDLIM7-201ENST00000355572 MEI4A8MW99 385 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 GJB3O75712 270 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 SOX5P35711 763 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 CXCR3P49682 368 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 NOVA1P51513 510 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 BPIFB4P59827 614 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 FAM193AP78312 1265 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 STX1AQ16623 288 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 SMYD5Q6GMV2 418 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 LAYNQ6UX15 382 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 ERICH1Q86X53 443 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 MINDY1Q8N5J2 469 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 AOPEPQ8N6M6 819 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 JOSD2Q8TAC2 188 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 SLC30A5Q8TAD4 765 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 RNF34Q969K3 372 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 CFAP57Q96MR6 1250 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 NOX5Q96PH1 765 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 PSMB7Q99436 277 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 TKTL2Q9H0I9 626 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 SYNCQ9H7C4 482 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 EBF2Q9HAK2 575 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 IL21RQ9HBE5 538 aa17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 METTL5Q9NRN9 209 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 KIAA1522Q9P206 1035 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-201ENST00000355572 A0A1B0GVM2 712 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 TYW5A2RUC4 315 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 TCAF2A6NFQ2 919 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 LGALS16A8MUM7 142 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 C10orf142B7Z368 130 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 RNF103O00237 685 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 PLK4O00444 970 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 ARHGAP33O14559 1287 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 MID1O15344 667 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 ASLP04424 464 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 ACADMP11310 421 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 CD59P13987 128 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 ABCB4P21439 1286 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 HOXD12P35452 270 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 MYL5Q02045 173 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 TYRO3Q06418 890 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 GRIK2Q13002 908 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 SEMA3BQ13214 749 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 C5orf22Q49AR2 442 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 SASS6Q6UVJ0 657 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms