RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 DCAF6Q58WW2 860 aa18.68■□□□□ 0.58
SPNS3-201ENST00000355530 RAPH1Q70E73 1250 aa18.68■□□□□ 0.58
SPNS3-201ENST00000355530 FASTKD5Q7L8L6 764 aaKnown RBP18.68■□□□□ 0.58
SPNS3-201ENST00000355530 BNIPLQ7Z465 357 aa18.68■□□□□ 0.58
SPNS3-201ENST00000355530 DCLK2Q8N568 766 aa18.68■□□□□ 0.58
SPNS3-201ENST00000355530 SREK1Q8WXA9 508 aaKnown RBP18.68■□□□□ 0.58
SPNS3-201ENST00000355530 NT5C3BQ969T7 300 aa18.68■□□□□ 0.58
SPNS3-201ENST00000355530 TNIP3Q96KP6 325 aa18.68■□□□□ 0.58
SPNS3-201ENST00000355530 PAPOLBQ9NRJ5 636 aaKnown RBP18.68■□□□□ 0.58
SPNS3-201ENST00000355530 STAP1Q9ULZ2 295 aa18.68■□□□□ 0.58
SPNS3-201ENST00000355530 TSC2P49815 1807 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 TMEM114B3SHH9 223 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 UBTFL6P0CB48 400 aaPredicted RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 GNAT1P11488 350 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 NOS2P35228 1153 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 EPHB1P54762 984 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 CCNIQ14094 377 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 CMC1Q7Z7K0 106 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 PIGZQ86VD9 579 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 PHC3Q8NDX5 983 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 APPL2Q8NEU8 664 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 NPY6RQ99463 290 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 ADAMTS10Q9H324 1103 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 IL1RAPL1Q9NZN1 696 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 HES2Q9Y543 173 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 EEF2KO00418 725 aaKnown RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 CREB3O43889 395 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 H2AFYO75367 372 aaKnown RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 CHRM1P11229 460 aaPredicted RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 NCF2P19878 526 aaPredicted RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 TKTP29401 623 aaKnown RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 PAPOLAP51003 745 aaKnown RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 XIAPP98170 497 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 ASPHQ12797 758 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 SMAD1Q15797 465 aaKnown RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 CFAP157Q5JU67 520 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 VWA5B1Q5TIE3 1220 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 CES3Q6UWW8 571 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 ACAD11Q709F0 780 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 PYDC1Q8WXC3 89 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 ZNF669Q96BR6 464 aaPredicted RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 SH3GL3Q99963 347 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 CDH19Q9H159 772 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 NXF3Q9H4D5 531 aaKnown RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 KLHL8Q9P2G9 620 aaPredicted RBP18.67■□□□□ 0.58
SPNS3-201ENST00000355530 GJD2Q9UKL4 321 aa18.67■□□□□ 0.58
SPNS3-201ENST00000355530 SBF1O95248 1867 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 DCLK1O15075 740 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 HSPA4LO95757 839 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 AP2A1O95782 977 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 MPOP05164 745 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 ITGAXP20702 1163 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 ADCYAP1R1P41586 468 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 PCBP1Q15365 356 aaKnown RBP eCLIP18.66■□□□□ 0.58
SPNS3-201ENST00000355530 ZNF792Q3KQV3 632 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 THEMIS2Q5TEJ8 643 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 FOXB2Q5VYV0 432 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 PID1Q7Z2X4 250 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 STRA8Q7Z7C7 330 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 TMEM135Q86UB9 458 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 PDSS2Q86YH6 399 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 NETO2Q8NC67 525 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 OR52K1Q8NGK4 314 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 SHKBP1Q8TBC3 707 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 SLC26A7Q8TE54 656 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 FCRL3Q96P31 734 aaPredicted RBP18.66■□□□□ 0.58
SPNS3-201ENST00000355530 GBP5Q96PP8 586 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 VANGL2Q9ULK5 521 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 GINS2Q9Y248 185 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 RAD54BQ9Y620 910 aa18.66■□□□□ 0.58
SPNS3-201ENST00000355530 SPTLC1O15269 473 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 ADCY6O43306 1168 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 PDE5AO76074 875 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 CDC42EP1Q00587 391 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 METTL21CQ5VZV1 264 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 EPGNQ6UW88 154 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 PDZD4Q76G19 769 aaPredicted RBP18.65■□□□□ 0.58
SPNS3-201ENST00000355530 DEFB107AQ8IZN7 70 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 GALNT15Q8N3T1 639 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 COG4Q9H9E3 785 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 CYP4F11Q9HBI6 524 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 TMPRSS4Q9NRS4 437 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 ZNF358Q9NW07 568 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 BFARQ9NZS9 450 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 RGS17Q9UGC6 210 aaPredicted RBP18.65■□□□□ 0.58
SPNS3-201ENST00000355530 ARHGAP26Q9UNA1 814 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 EME2A4GXA9 379 aaPredicted RBP18.65■□□□□ 0.58
SPNS3-201ENST00000355530 ERI2A8K979 691 aaKnown RBP18.65■□□□□ 0.58
SPNS3-201ENST00000355530 M0QYT0 321 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 XPOTO43592 962 aaKnown RBP18.65■□□□□ 0.58
SPNS3-201ENST00000355530 ACAT1P24752 427 aaKnown RBP18.65■□□□□ 0.58
SPNS3-201ENST00000355530 TAF6P49848 677 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 AIF1P55008 147 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 PITX1P78337 314 aaPredicted RBP18.65■□□□□ 0.58
SPNS3-201ENST00000355530 ROR2Q01974 943 aaKnown RBP18.65■□□□□ 0.58
SPNS3-201ENST00000355530 CUL3Q13618 768 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 SV2CQ496J9 727 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 FSTL4Q6MZW2 842 aa18.65■□□□□ 0.58
SPNS3-201ENST00000355530 LIMS2Q7Z4I7 341 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms