RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CLPBQ9H078 707 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 EPB41L4BQ9H329 900 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 CISHQ9NSE2 258 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 TRNAU1APQ9NX07 287 aaKnown RBP12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 ATP6V1HQ9UI12 483 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 STOML2Q9UJZ1 356 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 ADAM28Q9UKQ2 775 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 AK9Q5TCS8 1911 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 A0A0U1RQJ8 604 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 HMBSP08397 361 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 PHKG1Q16816 387 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 ATAD3BQ5T9A4 648 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 EGFLAMQ63HQ2 1017 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 SV2AQ7L0J3 742 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 SLC44A2Q8IWA5 706 aaPredicted RBP12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 DCP1BQ8IZD4 617 aaKnown RBP12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 APOL2Q9BQE5 337 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 PTTG2Q9NZH5 202 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 TRHDEQ9UKU6 1024 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 SALL1Q9NSC2 1324 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 STX4Q12846 297 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 GRIK3Q13003 919 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 SEC23AQ15436 765 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 CHMP1BQ7LBR1 199 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 GALNT15Q8N3T1 639 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 OSBPL6Q9BZF3 934 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 SETBP1Q9Y6X0 1596 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 ERI2A8K979 691 aaKnown RBP12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 JCHAINP01591 159 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 AKAP5P24588 427 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 GPC1P35052 558 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 NPTX2P47972 431 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 ACVR2BQ13705 512 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 B3GALNT2Q8NCR0 500 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 ERAP1Q9NZ08 941 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 TPP1O14773 563 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 RFX4Q33E94 735 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 WDR59Q6PJI9 974 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 TRIM74Q86UV6 250 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 TRIM73Q86UV7 250 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 ACOX2Q99424 681 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF12P17014 697 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 PAICSP22234 425 aaKnown RBP12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 CENPAP49450 140 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 SPIDRQ14159 915 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZSWIM2Q8NEG5 633 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 KLHL32Q96NJ5 620 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 SLC4A5Q9BY07 1137 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 PDGFCQ9NRA1 345 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 FBXO21O94952 628 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 LBPP18428 481 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 PPP2R1BP30154 601 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 SUN5Q8TC36 379 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 MYLPFQ96A32 169 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 ACTR8Q9H981 624 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 UBQLN1Q9UMX0 589 aaKnown RBP12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 INVSQ9Y283 1065 aa12.95□□□□□ -0.34
SYNCRIP-201ENST00000355238 DPYSL4O14531 572 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 DBTP11182 482 aaKnown RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 TMEM119Q4V9L6 283 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 RNF19BQ6ZMZ0 732 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 TMEM176AQ96HP8 235 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 ASTN2O75129 1339 aaPredicted RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 GNG14A0A1W2PPG7 69 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 CCDC162PA2VCL2 907 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 ENTPD3O75355 529 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 RTN3O95197 1032 aaPredicted RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 PTPN11Q06124 597 aaPredicted RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 PUDPQ08623 228 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 UBAP2LQ14157 1087 aaKnown RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 CLEC10AQ8IUN9 316 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 PRDM16Q9HAZ2 1276 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 GIN1Q9NXP7 522 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF221Q9UK13 617 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 GMPPBQ9Y5P6 360 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 FAM205AQ6ZU69 1335 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 HBP1O60381 514 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 MAGEC1O60732 1142 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 KCNH1O95259 989 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 CDC42P60953 191 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 STARD8Q92502 1023 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 TPD52L3Q96J77 140 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 RTKNQ9BST9 563 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 A0A087X0B3 334 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 BCLAF3A2AJT9 711 aaKnown RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 GSSP48637 474 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 TYSND1Q2T9J0 566 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 C16orf46Q6P387 395 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF540Q8NDQ6 660 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 INPP4AQ96PE3 977 aaPredicted RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 MOV10Q9HCE1 1003 aaKnown RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 KLHL1Q9NR64 748 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms