RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 APOBEC2Q9Y235 224 aaKnown RBP16.43■□□□□ 0.22
PDGFA-201ENST00000354513 A0A1W2PP55 124 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 WNT9AO14904 365 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 AFPP02771 609 aaKnown RBP16.42■□□□□ 0.22
PDGFA-201ENST00000354513 TACR2P21452 398 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 PPP1R2P41236 205 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 NUMBP49757 651 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 STK19P49842 368 aaPredicted RBP16.42■□□□□ 0.22
PDGFA-201ENST00000354513 GALCP54803 685 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 IL9RQ01113 521 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 APBA1Q02410 837 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 SHBQ15464 509 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 TAF5Q15542 800 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 MEA1Q16626 185 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 ZC3H12AQ5D1E8 599 aaKnown RBP16.42■□□□□ 0.22
PDGFA-201ENST00000354513 TMPRSS7Q7RTY8 843 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 TMEM110Q86TL2 294 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 CIR1Q86X95 450 aaPredicted RBP16.42■□□□□ 0.22
PDGFA-201ENST00000354513 LGI2Q8N0V4 545 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 ZNF557Q8N988 423 aaPredicted RBP16.42■□□□□ 0.22
PDGFA-201ENST00000354513 KDM1BQ8NB78 822 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 MDM1Q8TC05 714 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 IGSF8Q969P0 613 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 ST7Q9NRC1 585 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 FBXL12Q9NXK8 326 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 ADAMTS1Q9UHI8 967 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 SLCO3A1Q9UIG8 710 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 AJAP1Q9UKB5 411 aaPredicted RBP16.42■□□□□ 0.22
PDGFA-201ENST00000354513 LHX6Q9UPM6 363 aa16.42■□□□□ 0.22
PDGFA-201ENST00000354513 SRPRAP08240 638 aaKnown RBP16.41■□□□□ 0.22
PDGFA-201ENST00000354513 KRT5P13647 590 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 VAV1P15498 845 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 IRAK1P51617 712 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 METAP1P53582 386 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 CDH18Q13634 790 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 NCEH1Q6PIU2 408 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 LRSAM1Q6UWE0 723 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 MMAAQ8IVH4 418 aaKnown RBP16.41■□□□□ 0.22
PDGFA-201ENST00000354513 WDTC1Q8N5D0 677 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 RHBDD1Q8TEB9 315 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 STK32AQ8WU08 396 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 ZNF606Q8WXB4 792 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 PTPRN2Q92932 1015 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 DDX50Q9BQ39 737 aaKnown RBP16.41■□□□□ 0.22
PDGFA-201ENST00000354513 SRRTQ9BXP5 876 aaKnown RBP16.41■□□□□ 0.22
PDGFA-201ENST00000354513 NEUROG2Q9H2A3 272 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 HOOK1Q9UJC3 728 aaKnown RBP16.41■□□□□ 0.22
PDGFA-201ENST00000354513 SCML1Q9UN30 329 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 GPSM3Q9Y4H4 160 aa16.41■□□□□ 0.22
PDGFA-201ENST00000354513 A0A1W2PPC4 97 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 A0A1W2PR77 199 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 BICDL2A1A5D9 508 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 PCDHGA12O60330 932 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 LETM1O95202 739 aaPredicted RBP16.4■□□□□ 0.22
PDGFA-201ENST00000354513 TRUB2O95900 331 aaKnown RBP16.4■□□□□ 0.22
PDGFA-201ENST00000354513 ACADSBP45954 432 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 CCT8P50990 548 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 PAK1Q13153 545 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 PDCLQ13371 301 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 TEAD4Q15561 434 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 CXorf57Q6NSI4 855 aaKnown RBP16.4■□□□□ 0.22
PDGFA-201ENST00000354513 CHSY1Q86X52 802 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 STK40Q8N2I9 435 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 OR52K2Q8NGK3 314 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 FAM131CQ96AQ9 280 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 RPL10LQ96L21 214 aaKnown RBP16.4■□□□□ 0.22
PDGFA-201ENST00000354513 CDC6Q99741 560 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 POPDC2Q9HBU9 364 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 UBE2TQ9NPD8 197 aaPredicted RBP16.4■□□□□ 0.22
PDGFA-201ENST00000354513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.4■□□□□ 0.22
PDGFA-201ENST00000354513 CACNA1GO43497 2377 aa16.4■□□□□ 0.22
PDGFA-201ENST00000354513 A0A1B0GTQ1 180 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 EDDM13A0A1B0GTR0 161 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 TARSL2A2RTX5 802 aaKnown RBP16.39■□□□□ 0.21
PDGFA-201ENST00000354513 FAM47DPA6NHR8 397 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 GOLGA8CPA6NN73 597 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 KCNU1A8MYU2 1149 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 VILLO15195 856 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 SART1O43290 800 aaKnown RBP16.39■□□□□ 0.21
PDGFA-201ENST00000354513 GNA14O95837 355 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 SLC9A1P19634 815 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 MZF1P28698 734 aaPredicted RBP16.39■□□□□ 0.21
PDGFA-201ENST00000354513 GNA15P30679 374 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 DRD3P35462 400 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 PSMD8P48556 350 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 ADPRHP54922 357 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 ST8SIA6P61647 398 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 PPP2CBP62714 309 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 RACK1P63244 317 aaKnown RBP16.39■□□□□ 0.21
PDGFA-201ENST00000354513 PPP2CAP67775 309 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 ECT2LQ008S8 904 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 CETN1Q12798 172 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 CAMK2BQ13554 666 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 OTUD1Q5VV17 481 aaPredicted RBP16.39■□□□□ 0.21
PDGFA-201ENST00000354513 TRIM65Q6PJ69 517 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 FRS2Q8WU20 508 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 ALG14Q96F25 216 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 BTN2A3PQ96KV6 586 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 SLC2A13Q96QE2 648 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 CPXM1Q96SM3 734 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms