RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SPATA32Q96LK8 384 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 NT5C1AQ9BXI3 368 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 EXOC1Q9NV70 894 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 SATB2Q9UPW6 733 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 NOTCH2Q04721 2471 aa16.47■□□□□ 0.23
DDX55-202ENST00000354291 A0A1B0GVM2 712 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 TERTO14746 1132 aaKnown RBP16.46■□□□□ 0.23
DDX55-202ENST00000354291 ACTN4O43707 911 aaKnown RBP16.46■□□□□ 0.23
DDX55-202ENST00000354291 MAGEC1O60732 1142 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 TBL1XO60907 577 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 ASPAP45381 313 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 ADPRHP54922 357 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 KRT85P78386 507 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 KMT5BQ4FZB7 885 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 ADGRF1Q5T601 910 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 C9orf64Q5T6V5 341 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 PPP1R26Q5T8A7 1209 aaPredicted RBP16.46■□□□□ 0.23
DDX55-202ENST00000354291 FOXR1Q6PIV2 292 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.46■□□□□ 0.23
DDX55-202ENST00000354291 GRAMD1CQ8IYS0 662 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 AADATQ8N5Z0 425 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 PARD3BQ8TEW8 1205 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 NDRG1Q92597 394 aaKnown RBP16.46■□□□□ 0.23
DDX55-202ENST00000354291 CCDC97Q96F63 343 aaPredicted RBP16.46■□□□□ 0.23
DDX55-202ENST00000354291 MYO19Q96H55 970 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 UCKL1Q9NWZ5 548 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 STIM2Q9P246 746 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 SFMBT1Q9UHJ3 866 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
DDX55-202ENST00000354291 SPTAN1Q13813 2472 aaKnown RBP16.45■□□□□ 0.22
DDX55-202ENST00000354291 A0A1B0GVL5 298 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 TTC34A8MYJ7 566 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 KLRC4O43908 158 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
DDX55-202ENST00000354291 PFKFB1P16118 471 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 CD58P19256 250 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 DGKAP23743 735 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 CSKP41240 450 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 ZNF445P59923 1031 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 STK4Q13043 487 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 POM121L1PQ3SYA9 428 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 RFWD3Q6PCD5 774 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 OR4C6Q8NH72 309 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 TMEM174Q8WUU8 243 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 SLC46A1Q96NT5 459 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 ARHGAP9Q9BRR9 750 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 ANKMY1Q9P2S6 941 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 TPX2Q9ULW0 747 aaKnown RBP16.45■□□□□ 0.22
DDX55-202ENST00000354291 CA5BQ9Y2D0 317 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 ATP6V1DQ9Y5K8 247 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
DDX55-202ENST00000354291 GOLGA6L7A0A1B0GV03 622 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 IL1BP01584 269 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 CKMT1AP12532 417 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 DLG4P78352 724 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 ARL13BQ3SXY8 428 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 IQCHQ86VS3 1027 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 SLC9A9Q8IVB4 645 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 STK40Q8N2I9 435 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 MAPK15Q8TD08 544 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 RNF139Q8WU17 664 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 TAF4BQ92750 862 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 TTC17Q96AE7 1141 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 KLHDC7BQ96G42 594 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 HEXIM2Q96MH2 286 aaKnown RBP16.44■□□□□ 0.22
DDX55-202ENST00000354291 FAM129BQ96TA1 746 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.44■□□□□ 0.22
DDX55-202ENST00000354291 ARHGAP20Q9P2F6 1191 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 HPSEQ9Y251 543 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 ZDHHC9Q9Y397 364 aa16.44■□□□□ 0.22
DDX55-202ENST00000354291 TLN1Q9Y490 2541 aaKnown RBP16.44■□□□□ 0.22
DDX55-202ENST00000354291 LRRK2Q5S007 2527 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 TARSL2A2RTX5 802 aaKnown RBP16.43■□□□□ 0.22
DDX55-202ENST00000354291 C10orf142B7Z368 130 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 PDXKO00764 312 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 LATO43561 262 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 ASS1P00966 412 aaKnown RBP16.43■□□□□ 0.22
DDX55-202ENST00000354291 C5AR1P21730 350 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 CLDN10P78369 228 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 OVGP1Q12889 678 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 ISXQ2M1V0 245 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 LINC00303Q3SY05 128 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 ZNF394Q53GI3 561 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 MFN1Q8IWA4 741 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 KIAA0895Q8NCT3 520 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 EDEM1Q92611 657 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 CCDC47Q96A33 483 aaKnown RBP16.43■□□□□ 0.22
DDX55-202ENST00000354291 ATXN7L3BQ96GX2 97 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 MRGPRX3Q96LB0 322 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 APOLD1Q96LR9 279 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 SCAND2PQ9GZW5 306 aaPredicted RBP16.43■□□□□ 0.22
DDX55-202ENST00000354291 CAAP1Q9H8G2 361 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 DMAC2Q9NW81 257 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 STOML2Q9UJZ1 356 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 HBS1LQ9Y450 684 aaKnown RBP16.43■□□□□ 0.22
DDX55-202ENST00000354291 CEP83Q9Y592 693 aa16.43■□□□□ 0.22
DDX55-202ENST00000354291 EDDM13A0A1B0GTR0 161 aa16.42■□□□□ 0.22
DDX55-202ENST00000354291 A0A1W2PNU3 283 aaPredicted RBP16.42■□□□□ 0.22
DDX55-202ENST00000354291 ZBED1O96006 694 aa16.42■□□□□ 0.22
DDX55-202ENST00000354291 ADH1BP00325 375 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms