RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 A0A087WXM4 84 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 HK2P52789 917 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 NBPF12Q5TAG4 269 aaPredicted RBP15.3■□□□□ 0.04
TRAF3-202ENST00000351691 CATSPERGQ6ZRH7 1159 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 CPSF7Q8N684 471 aaKnown RBP15.3■□□□□ 0.04
TRAF3-202ENST00000351691 ARFGAP1Q8N6T3 406 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 SCAIQ8N9R8 606 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 KCTD6Q8NC69 237 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 BHLHE22Q8NFJ8 381 aaPredicted RBP15.3■□□□□ 0.04
TRAF3-202ENST00000351691 EBNA1BP2Q99848 306 aaKnown RBP15.3■□□□□ 0.04
TRAF3-202ENST00000351691 EIF2AQ9BY44 585 aaKnown RBP15.3■□□□□ 0.04
TRAF3-202ENST00000351691 CDH19Q9H159 772 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 SDCBP2Q9H190 292 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 LIN28AQ9H9Z2 209 aaKnown RBP15.3■□□□□ 0.04
TRAF3-202ENST00000351691 ZNF302Q9NR11 478 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 RAB6BQ9NRW1 208 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 HACL1Q9UJ83 578 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 FAM32AQ9Y421 112 aaKnown RBP15.3■□□□□ 0.04
TRAF3-202ENST00000351691 LOC285556D6RIA3 1793 aa15.3■□□□□ 0.04
TRAF3-202ENST00000351691 TRIM64BA6NI03 449 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 K7ERI5 159 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 EGFRP00533 1210 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 INHBBP09529 407 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 COL6A2P12110 1019 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 PIK3R1P27986 724 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 SSTR3P32745 418 aaPredicted RBP15.29■□□□□ 0.04
TRAF3-202ENST00000351691 NUDT2P50583 147 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 NDST2P52849 883 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 GRM1Q13255 1194 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 PEX6Q13608 980 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 TMEM132BQ14DG7 1078 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 IRAK1BP1Q5VVH5 260 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 DNERQ8NFT8 737 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 TOP1MTQ969P6 601 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 PLEKHA8Q96JA3 519 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 LENG8Q96PV6 779 aaPredicted RBP15.29■□□□□ 0.04
TRAF3-202ENST00000351691 CDRT15Q96T59 188 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 NEURL2Q9BR09 285 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 ANKRD60Q9BZ19 345 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 HOXC10Q9NYD6 342 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 RBAKQ9NYW8 714 aaPredicted RBP15.29■□□□□ 0.04
TRAF3-202ENST00000351691 SELENONQ9NZV5 590 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 TMEM114B3SHH9 223 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 ACOT8O14734 319 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 ZMPSTE24O75844 475 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 ENDOD1O94919 500 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 RALBP11234 206 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 POLR2BP30876 1174 aaKnown RBP15.29■□□□□ 0.04
TRAF3-202ENST00000351691 CCR3P51677 355 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 C21orf59P57076 290 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 IKBKEQ14164 716 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 TFDP2Q14188 446 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 PPP2R5DQ14738 602 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 STXBP2Q15833 593 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 DEPDC1BQ8WUY9 529 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 AGAP3Q96P47 875 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 COG4Q9H9E3 785 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 MOCS1Q9NZB8 636 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 IPO11Q9UI26 975 aaKnown RBP15.29■□□□□ 0.04
TRAF3-202ENST00000351691 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 HEMK1Q9Y5R4 338 aaPredicted RBP15.29■□□□□ 0.04
TRAF3-202ENST00000351691 GJA3Q9Y6H8 435 aa15.29■□□□□ 0.04
TRAF3-202ENST00000351691 POLR2AP24928 1970 aaKnown RBP15.29■□□□□ 0.04
TRAF3-202ENST00000351691 A0A1B0GTW7 788 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 C7orf72A4D263 438 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 YBX3P16989 372 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 STEAP4Q687X5 459 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 C10orf107Q8IVU9 208 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 CHST13Q8NET6 341 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 EME1Q96AY2 570 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 C12orf43Q96C57 262 aaKnown RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 DUS3LQ96G46 650 aaKnown RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 SIGLEC10Q96LC7 697 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 MSTO1Q9BUK6 570 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 CAAP1Q9H8G2 361 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 MRPL40Q9NQ50 206 aaKnown RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 COPG2Q9UBF2 871 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 B3GNT3Q9Y2A9 372 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 AP4S1Q9Y587 144 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 ZNF541Q9H0D2 1346 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 IGKV6D-21A0A0A0MT36 114 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 TRIM64A6NGJ6 449 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 AIM2O14862 343 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 ADAM23O75077 832 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 H2AFYO75367 372 aaKnown RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 RNASEH2AO75792 299 aaKnown RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 MX2P20592 715 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 KCNA4P22459 653 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 EPHA3P29320 983 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 SLC5A3P53794 718 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 MS4A2Q01362 244 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 CEACAM7Q14002 265 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 PDE1CQ14123 709 aaPredicted RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 SMTNL2Q2TAL5 461 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 CCDC153Q494R4 210 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 KRT80Q6KB66 452 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 ZPBP2Q6X784 338 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 ATG14Q6ZNE5 492 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 CLVS1Q8IUQ0 354 aaPredicted RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 MICALL2Q8IY33 904 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms