RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 EBAG9O00559 213 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 MSI1O43347 362 aaKnown RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 ALDH1A2O94788 518 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 RTN3O95197 1032 aaPredicted RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 ASMTLO95671 621 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 CPP00450 1065 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 APOEP02649 317 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 SLC2A3P11169 496 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 CCNCP24863 283 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 YWHAQP27348 245 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PSMB4P28070 264 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 RFC2P35250 354 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 MSH2P43246 934 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PSEN1P49768 467 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 CCL23P55773 120 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 SARNPP82979 210 aaKnown RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 COG7P83436 770 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PPARDQ03181 441 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 SLC18A2Q05940 514 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 ZBTB17Q13105 803 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 MTM1Q13496 603 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 FRG1Q14331 258 aaKnown RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 TRIP4Q15650 581 aaPredicted RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 QPCTQ16769 361 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 KBTBD12Q3ZCT8 623 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 TRIM60Q495X7 471 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 TEX44Q53QW1 395 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 SYCP2LQ5T4T6 812 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 ZNF449Q6P9G9 518 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 CNKSR3Q6P9H4 555 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 RNF19BQ6ZMZ0 732 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 RGS9BPQ6ZS82 235 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 TAS1R1Q7RTX1 841 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PID1Q7Z2X4 250 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PIGWQ7Z7B1 504 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 SLC26A11Q86WA9 606 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 CEP57Q86XR8 500 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 LRRC49Q8IUZ0 686 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 CCNJLQ8IV13 435 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 MPP5Q8N3R9 675 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PDCD7Q8N8D1 485 aaKnown RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 CCNYQ8ND76 341 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 GSDMBQ8TAX9 411 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 FATE1Q969F0 183 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 RNF34Q969K3 372 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 ALKBH8Q96BT7 664 aaKnown RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 TBC1D31Q96DN5 1066 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 B3GALT6Q96L58 329 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 TEKT5Q96M29 485 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PGLYRP2Q96PD5 576 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 IL12RB2Q99665 862 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PRMT1Q99873 361 aaKnown RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 TTPALQ9BTX7 342 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 MLPHQ9BV36 600 aaPredicted RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 VN1R3Q9BXE9 311 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 GBA3Q9H227 469 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 RABEP2Q9H5N1 569 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 CATSPERBQ9H7T0 1116 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 CASS4Q9NQ75 786 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PRDM5Q9NQX1 630 aaPredicted RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 SMYD2Q9NRG4 433 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 OLA1Q9NTK5 396 aaKnown RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PPARGC1AQ9UBK2 798 aaKnown RBP7.1□□□□□ -1.27
TRIM55-203ENST00000350034 RSPH14Q9UHP6 348 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 PCDHA11Q9Y5I1 949 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 HS3ST4Q9Y661 456 aa7.1□□□□□ -1.27
TRIM55-203ENST00000350034 COL4A6Q14031 1691 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 IGLV3-10A0A075B6K4 115 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 IQANK1A0A1B0GTG1 560 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 DRGXA6NNA5 263 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 CXorf49A8MYA2 514 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 NT5C1B-RDH14C9J2C7 533 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 E9PAM4 449 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 KCNK1O00180 336 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 ZBTB24O43167 697 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 ADAM12O43184 909 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 PSMD3O43242 534 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 MAFKO60675 156 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 AP2A1O95782 977 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 OAS1P00973 400 aaKnown RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 KRT15P19012 456 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 CCNFP41002 786 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 IFNAR2P48551 515 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 ATN1P54259 1190 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 TBX4P57082 545 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 RPL10AP62906 217 aaKnown RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 RING1Q06587 406 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 NIPAL4Q0D2K0 466 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 IFRD2Q12894 506 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 TAF10Q12962 218 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 ACBD5Q5T8D3 534 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 RASIP1Q5U651 963 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 PIK3R6Q5UE93 754 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 SNX30Q5VWJ9 437 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 NUGGCQ68CJ6 796 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 ITPRIPL1Q6GPH6 555 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 TIFABQ6ZNK6 161 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 YTHDF3Q7Z739 585 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms