RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 NENFQ9UMX5 172 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 ZFHX2Q9C0A1 2572 aaPredicted RBP22.79■■□□□ 1.24
SNX3-202ENST00000349379 ATMINO43313 823 aaPredicted RBP22.78■■□□□ 1.24
SNX3-202ENST00000349379 DLDP09622 509 aaKnown RBP22.78■■□□□ 1.24
SNX3-202ENST00000349379 GABRG2P18507 467 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 PRKCHP24723 683 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 ADRA1BP35368 520 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 PLK1P53350 603 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 CDH4P55283 916 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 NRG1Q02297 640 aaPredicted RBP22.78■■□□□ 1.24
SNX3-202ENST00000349379 SLC12A1Q13621 1099 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 SIM2Q14190 667 aaPredicted RBP22.78■■□□□ 1.24
SNX3-202ENST00000349379 PLEKHG6Q3KR16 790 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 VPS36Q86VN1 386 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 CYB5D2Q8WUJ1 264 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 MYO19Q96H55 970 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 CNPY3Q9BT09 278 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 RBSNQ9H1K0 784 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 RAD54BQ9Y620 910 aa22.78■■□□□ 1.24
SNX3-202ENST00000349379 A0A087X0T9 212 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 E9PAM4 449 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 CLDN11O75508 207 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 RPP40O75818 363 aaKnown RBP22.77■■□□□ 1.24
SNX3-202ENST00000349379 ASLP04424 464 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 ATP5BP06576 529 aaKnown RBP22.77■■□□□ 1.24
SNX3-202ENST00000349379 FAM228BP0C875 321 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 C7P10643 843 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 POLR2EP19388 210 aaKnown RBP22.77■■□□□ 1.24
SNX3-202ENST00000349379 CSKP41240 450 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 ALFQ53S48 1182 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 PITRM1Q5JRX3 1037 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 MANEALQ5VSG8 457 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 DCUN1D2Q6PH85 259 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 GAS2L3Q86XJ1 694 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 OR8K1Q8NGG5 319 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 OR52K2Q8NGK3 314 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 ALG14Q96F25 216 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 TRIM11Q96F44 468 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 TPSD1Q9BZJ3 242 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 OSBPL2Q9H1P3 480 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 ZNF212Q9UDV6 495 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 CNOT8Q9UFF9 292 aaKnown RBP22.77■■□□□ 1.24
SNX3-202ENST00000349379 TBC1D30Q9Y2I9 924 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 SDK1Q7Z5N4 2213 aa22.77■■□□□ 1.24
SNX3-202ENST00000349379 ANKRD62A6NC57 917 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 TMEM191CA6NGB0 347 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 CNTN5O94779 1100 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 MYBL1P10243 752 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 OXCT1P55809 520 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 SCAPQ12770 1279 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 ARL13BQ3SXY8 428 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 SERPINA13PQ6UXR4 307 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 APCDD1Q8J025 514 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 CCDC185Q8N715 623 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 FNIP1Q8TF40 1166 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 HMGB4Q8WW32 186 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 ZNF653Q96CK0 615 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 MRGPRX3Q96LB0 322 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 PLA2G4CQ9UP65 541 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 OR51B4Q9Y5P0 310 aa22.76■■□□□ 1.23
SNX3-202ENST00000349379 MFAP3LO75121 409 aa22.75■■□□□ 1.23
SNX3-202ENST00000349379 NDUFV2P19404 249 aa22.75■■□□□ 1.23
SNX3-202ENST00000349379 MZF1P28698 734 aaPredicted RBP22.75■■□□□ 1.23
SNX3-202ENST00000349379 ZNF252P-AS1Q0IIN9 211 aa22.75■■□□□ 1.23
SNX3-202ENST00000349379 TBX2Q13207 712 aaPredicted RBP22.75■■□□□ 1.23
SNX3-202ENST00000349379 STARD3Q14849 445 aa22.75■■□□□ 1.23
SNX3-202ENST00000349379 LRRC31Q6UY01 552 aa22.75■■□□□ 1.23
SNX3-202ENST00000349379 KDM1BQ8NB78 822 aa22.75■■□□□ 1.23
SNX3-202ENST00000349379 ZC3H10Q96K80 434 aaKnown RBP22.75■■□□□ 1.23
SNX3-202ENST00000349379 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.75■■□□□ 1.23
SNX3-202ENST00000349379 PPARGC1AQ9UBK2 798 aaKnown RBP22.75■■□□□ 1.23
SNX3-202ENST00000349379 SCINQ9Y6U3 715 aa22.75■■□□□ 1.23
SNX3-202ENST00000349379 EP300Q09472 2414 aaPredicted RBP22.74■■□□□ 1.23
SNX3-202ENST00000349379 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.74■■□□□ 1.23
SNX3-202ENST00000349379 MOCS3O95396 460 aa22.74■■□□□ 1.23
SNX3-202ENST00000349379 SRPRAP08240 638 aaKnown RBP22.74■■□□□ 1.23
SNX3-202ENST00000349379 P2RY2P41231 377 aa22.74■■□□□ 1.23
SNX3-202ENST00000349379 ZNF177Q13360 481 aaPredicted RBP22.74■■□□□ 1.23
SNX3-202ENST00000349379 MAPK8IP2Q13387 824 aaPredicted RBP22.74■■□□□ 1.23
SNX3-202ENST00000349379 CAMK2GQ13555 558 aaPredicted RBP22.74■■□□□ 1.23
SNX3-202ENST00000349379 ASTE1Q2TB18 679 aaPredicted RBP22.74■■□□□ 1.23
SNX3-202ENST00000349379 MAP7D1Q3KQU3 841 aa22.74■■□□□ 1.23
SNX3-202ENST00000349379 USP39Q53GS9 565 aaKnown RBP22.74■■□□□ 1.23
SNX3-202ENST00000349379 PRR23BQ6ZRT6 265 aa22.74■■□□□ 1.23
SNX3-202ENST00000349379 TMC6Q7Z403 805 aa22.74■■□□□ 1.23
SNX3-202ENST00000349379 MRGPRX1Q96LB2 322 aa22.74■■□□□ 1.23
SNX3-202ENST00000349379 TRIM5Q9C035 493 aa22.74■■□□□ 1.23
SNX3-202ENST00000349379 ABHD10Q9NUJ1 306 aa22.74■■□□□ 1.23
SNX3-202ENST00000349379 BCCIPQ9P287 314 aaKnown RBP eCLIP22.74■■□□□ 1.23
SNX3-202ENST00000349379 NEU3Q9UQ49 428 aa22.74■■□□□ 1.23
SNX3-202ENST00000349379 SSU72P8A0A1W2PR75 194 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 HLA-EP13747 358 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 EIF4A3P38919 411 aaKnown RBP22.73■■□□□ 1.23
SNX3-202ENST00000349379 COPAP53621 1224 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 AIF1P55008 147 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 FNDC3BQ53EP0 1204 aaKnown RBP22.73■■□□□ 1.23
SNX3-202ENST00000349379 LAIR1Q6GTX8 287 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 ALKBH5Q6P6C2 394 aaKnown RBP22.73■■□□□ 1.23
SNX3-202ENST00000349379 CEP68Q76N32 757 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 SETD3Q86TU7 594 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms