RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CERS2Q96G23 380 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 GORASP1Q9BQQ3 440 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 COG4Q9H9E3 785 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 GTF2IRD1Q9UHL9 959 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 GOLGA8QA0A0J9YX86 632 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 GOLGA8OA6NCC3 632 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 GOLGA8NF8WBI6 632 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 M0QYT0 321 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 MLNP12872 115 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 IRX1P78414 480 aaPredicted RBP18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 KYAT1Q16773 422 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 SFT2D3Q587I9 215 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 CERCAMQ5T4B2 595 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 FSTL4Q6MZW2 842 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 STRA8Q7Z7C7 330 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 BEST2Q8NFU1 509 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 ACMSDQ8TDX5 336 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 PPP4R1Q8TF05 950 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 ZNF669Q96BR6 464 aaPredicted RBP18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 PAPOLBQ9NRJ5 636 aaKnown RBP18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 UBP1Q9NZI7 540 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 LTBP3Q9NS15 1303 aa18.54■□□□□ 0.56
PTP4A3-202ENST00000349124 KPNA7A9QM74 516 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 ATP9BO43861 1147 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 LTFP02788 710 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 POLE2P56282 527 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 ASPHQ12797 758 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 ZRSR2Q15696 482 aaKnown RBP18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 SLC25A52Q3SY17 297 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 HSP90AA5PQ58FG0 334 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 FBXO47Q5MNV8 452 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 TMCO4Q5TGY1 634 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 SMYD5Q6GMV2 418 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 GPC2Q8N158 579 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 PPTC7Q8NI37 304 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 PIGVQ9NUD9 493 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 SNX10Q9Y5X0 201 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 MRPL42Q9Y6G3 142 aaKnown RBP18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 KLHL2O95198 593 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 IFRD2Q12894 506 aaPredicted RBP18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 CUL3Q13618 768 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 ITGA7Q13683 1181 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 PPP2R5DQ14738 602 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 UNC93AQ86WB7 457 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 OSTM1Q86WC4 334 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 NT5DC4Q86YG4 428 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 CRYBG2Q8N1P7 616 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 DCPSQ96C86 337 aaKnown RBP18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 OPTNQ96CV9 577 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 ADAMTS10Q9H324 1103 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 SNX25Q9H3E2 840 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 DDX43Q9NXZ2 648 aaKnown RBP18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 A0A0G2JMZ2 1700 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 LRRC37A2A6NM11 1700 aa18.53■□□□□ 0.56
PTP4A3-202ENST00000349124 OPHN1O60890 802 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 POLBP06746 335 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 ITGAXP20702 1163 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 SAT1P21673 171 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 CRABP2P29373 138 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 MSX2P35548 267 aaPredicted RBP18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 GP5P40197 560 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 TBCCQ15814 346 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 STXBP5Q5T5C0 1151 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 ISLR2Q6UXK2 745 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 STRADAQ7RTN6 431 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 OR52B2Q96RD2 323 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 WDR55Q9H6Y2 383 aaPredicted RBP18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 SPATS2LQ9NUQ6 558 aaKnown RBP18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 KLHL8Q9P2G9 620 aaPredicted RBP18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 CDH22Q9UJ99 828 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 CITO14578 2027 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 SMIM28A0A1B0GU29 152 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 ASB14A6NK59 587 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 IREB2P48200 963 aaKnown RBP18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 SNX16P57768 344 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 SLC27A1Q6PCB7 646 aa18.52■□□□□ 0.56
PTP4A3-202ENST00000349124 HACD1B0YJ81 288 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 CXCL11O14625 94 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 NRP1O14786 923 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 FESP07332 822 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 CHRNGP07510 517 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 PEX2P28328 305 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 PGM2L1Q6PCE3 622 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 ALKAL1Q6UXT8 129 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 DNAAF3Q8N9W5 541 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 PLEKHA5Q9HAU0 1116 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 CHRAC1Q9NRG0 131 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 POMPQ9Y244 141 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 G3V2L1 256 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 ZBTB24O43167 697 aaPredicted RBP18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 HARS2P49590 506 aaKnown RBP18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 PAPOLAP51003 745 aaKnown RBP18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 SLC30A9Q6PML9 568 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 LRRC52Q8N7C0 313 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 TMEM40Q8WWA1 233 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 MROH8Q9H579 483 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 GPAMQ9HCL2 828 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 A0A096LPK6 155 aa18.51■□□□□ 0.55
PTP4A3-202ENST00000349124 PIRO00625 290 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms