RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CCDC181Q5TID7 509 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 FYB2Q5VWT5 728 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 PTCRAQ6ISU1 281 aaPredicted RBP19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 RHBDF2Q6PJF5 856 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 ADGRG2Q8IZP9 1017 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 LRRN4CLQ8ND94 238 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 OR52K2Q8NGK3 314 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 WFDC5Q8TCV5 224 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 LRRN4Q8WUT4 740 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 C1orf54Q8WWF1 131 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 ATG4AQ8WYN0 398 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 TMA16Q96EY4 203 aaKnown RBP19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 FAM83CQ9BQN1 747 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 PHF7Q9BWX1 381 aaPredicted RBP19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 NOL6Q9H6R4 1146 aaKnown RBP19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 CATSPERBQ9H7T0 1116 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 TMEM248Q9NWD8 314 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 NYNRINQ9P2P1 1898 aaKnown RBP19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 RNF14Q9UBS8 474 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 CLEC4EQ9ULY5 219 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 NUMBLQ9Y6R0 609 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 CHD5Q8TDI0 1954 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 FGF10O15520 208 aaPredicted RBP19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 ECI2O75521 394 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 CHKAP35790 457 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 PAFAH1B1P43034 410 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 IFNAR2P48551 515 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 OTUD4Q01804 1114 aaKnown RBP19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 FCHO2Q0JRZ9 810 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 TUBB2AQ13885 445 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 KCTD19Q17RG1 926 aaPredicted RBP19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 LY6G5CQ5SRR4 150 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 TMCO3Q6UWJ1 677 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 B4GALNT4Q76KP1 1039 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 ARHGAP12Q8IWW6 846 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 HJURPQ8NCD3 748 aaPredicted RBP19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 ACTL9Q8TC94 416 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 IRF7Q92985 503 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 CELF6Q96J87 481 aaKnown RBP19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 RPGRIP1Q96KN7 1286 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 TUBB2BQ9BVA1 445 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 CARD6Q9BX69 1037 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 COL25A1Q9BXS0 654 aaPredicted RBP19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 HPS4Q9NQG7 708 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 DTLQ9NZJ0 730 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 HEY1Q9Y5J3 304 aa19.54■□□□□ 0.72
CHMP4A-201ENST00000347519 OTOL1A6NHN0 477 aaPredicted RBP19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 APOC4-APOC2K7ER74 178 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 KRIT1O00522 736 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 SLC9A3R1O14745 358 aaPredicted RBP19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 APOC2P02655 101 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 CYP17A1P05093 508 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 TGM2P21980 687 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 HOXD9P28356 352 aaPredicted RBP19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 CDH4P55283 916 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 TNK2Q07912 1038 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 C2orf54Q08AI8 447 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 DHCR24Q15392 516 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 MPPE1Q53F39 396 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 AFMIDQ63HM1 303 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 RNF43Q68DV7 783 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 ZNF572Q7Z3I7 529 aaPredicted RBP19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 KIAA1958Q8N8K9 716 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 DDI1Q8WTU0 396 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 E2F7Q96AV8 911 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 OTUB2Q96DC9 234 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 EBF3Q9H4W6 596 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 C10orf88Q9H8K7 445 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 SPHK2Q9NRA0 654 aa19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 RBM12Q9NTZ6 932 aaKnown RBP19.53■□□□□ 0.72
CHMP4A-201ENST00000347519 ZFXP17010 805 aaPredicted RBP19.52■□□□□ 0.72
CHMP4A-201ENST00000347519 NUMBP49757 651 aa19.52■□□□□ 0.72
CHMP4A-201ENST00000347519 FSCBQ5H9T9 825 aa19.52■□□□□ 0.72
CHMP4A-201ENST00000347519 FAM182AQ5T1J6 154 aa19.52■□□□□ 0.72
CHMP4A-201ENST00000347519 CXorf57Q6NSI4 855 aaKnown RBP19.52■□□□□ 0.72
CHMP4A-201ENST00000347519 MTSS1LQ765P7 747 aa19.52■□□□□ 0.72
CHMP4A-201ENST00000347519 CHST9Q7L1S5 443 aa19.52■□□□□ 0.72
CHMP4A-201ENST00000347519 SPATA4Q8NEY3 305 aa19.52■□□□□ 0.72
CHMP4A-201ENST00000347519 SLC39A8Q9C0K1 460 aa19.52■□□□□ 0.72
CHMP4A-201ENST00000347519 A0A1B0GVM2 712 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 TCAF2A6NFQ2 919 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 LUC7L3O95232 432 aaKnown RBP19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 PENKP01210 267 aaPredicted RBP19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 PSMC3P17980 439 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 CKAP4Q07065 602 aaKnown RBP19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 SNX1Q13596 522 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 NOMO1Q15155 1222 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 GAB4Q2WGN9 574 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 TTC39BQ5VTQ0 682 aaPredicted RBP19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 ASTLQ6HA08 431 aaPredicted RBP19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 TTC27Q6P3X3 843 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 CARNMT1Q8N4J0 409 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 DEPDC1BQ8WUY9 529 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 MAIP1Q8WWC4 291 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 OLFM3Q96PB7 478 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 NAP1L3Q99457 506 aaPredicted RBP19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 BBS2Q9BXC9 721 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 LRRC19Q9H756 370 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 PRDM16Q9HAZ2 1276 aa19.51■□□□□ 0.71
CHMP4A-201ENST00000347519 THG1LQ9NWX6 298 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms