RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 SEMA5AQ13591 1074 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 STEAP4Q687X5 459 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 TDRD5Q8NAT2 981 aaKnown RBP18.21■□□□□ 0.51
VHL-202ENST00000345392 KLHL23Q8NBE8 558 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 ZFRQ96KR1 1074 aaKnown RBP18.21■□□□□ 0.51
VHL-202ENST00000345392 LGMNQ99538 433 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 GCOM2Q9BZD3 368 aaPredicted RBP18.21■□□□□ 0.51
VHL-202ENST00000345392 SNX15Q9NRS6 342 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 CDY2AQ9Y6F7 541 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 CDY1Q9Y6F8 540 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 SIP14410 1827 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 LCTP09848 1927 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 FAM58BPP0C7Q3 252 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 ENO3P13929 434 aaPredicted RBP18.21■□□□□ 0.51
VHL-202ENST00000345392 SDC4P31431 198 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 TMED1Q13445 227 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 CYTH1Q15438 398 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 DLG2Q15700 870 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 HSP90AA5PQ58FG0 334 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 AHI1Q8N157 1196 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 KYQ8NBH2 561 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 FAM156AQ8NDB6 213 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 B3GNT5Q9BYG0 378 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 NRBP2Q9NSY0 501 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 MGAMO43451 1857 aa18.21■□□□□ 0.5
VHL-202ENST00000345392 INO80B-WBP1J3KQ70 363 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 MAGEB3O15480 346 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 CHRNGP07510 517 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 PRDX6P30041 224 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 NDST1P52848 882 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 IRF9Q00978 393 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 CEACAM7Q14002 265 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 ZNF423Q2M1K9 1284 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 PMF1Q6P1K2 205 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 KLC3Q6P597 504 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 CATSPERGQ6ZRH7 1159 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 DCLK2Q8N568 766 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 KBTBD7Q8WVZ9 684 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 RCN3Q96D15 328 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 MARK4Q96L34 752 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 INO80BQ9C086 356 aaPredicted RBP18.2■□□□□ 0.5
VHL-202ENST00000345392 ZNF696Q9H7X3 374 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 CAB39LQ9H9S4 337 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 SYBUQ9NX95 663 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 MAFO75444 373 aaPredicted RBP18.2■□□□□ 0.5
VHL-202ENST00000345392 PFKMP08237 780 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 VDRP11473 427 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 NELFEP18615 380 aaKnown RBP18.2■□□□□ 0.5
VHL-202ENST00000345392 ADARP55265 1226 aaKnown RBP18.2■□□□□ 0.5
VHL-202ENST00000345392 COG7P83436 770 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 CYLC2Q14093 348 aaPredicted RBP18.2■□□□□ 0.5
VHL-202ENST00000345392 ATF7IP2Q5U623 682 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 MPZL3Q6UWV2 235 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 BNC2Q6ZN30 1099 aaPredicted RBP18.2■□□□□ 0.5
VHL-202ENST00000345392 CYS1Q717R9 158 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 ZNF410Q86VK4 478 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 TICAM1Q8IUC6 712 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 COLGALT1Q8NBJ5 622 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 GAB3Q8WWW8 586 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 SERPINI1Q99574 410 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 ZNF670Q9BS34 389 aa18.2■□□□□ 0.5
VHL-202ENST00000345392 LIN28AQ9H9Z2 209 aaKnown RBP18.2■□□□□ 0.5
VHL-202ENST00000345392 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.19■□□□□ 0.5
VHL-202ENST00000345392 LTFP02788 710 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 THRAP10827 490 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 GLDCP23378 1020 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 MPSTP25325 297 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 DPP6P42658 865 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 NRF1Q16656 503 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 TMEM198Q66K66 360 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 JADE1Q6IE81 842 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 RPF1Q9H9Y2 349 aaKnown RBP18.19■□□□□ 0.5
VHL-202ENST00000345392 GBA2Q9HCG7 927 aaPredicted RBP18.19■□□□□ 0.5
VHL-202ENST00000345392 ADAMTS5Q9UNA0 930 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 HES2Q9Y543 173 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 RGSL1A5PLK6 1076 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 LACTBL1A8MY62 500 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 TRMUO75648 421 aaKnown RBP18.19■□□□□ 0.5
VHL-202ENST00000345392 INSCQ1MX18 579 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 PIGGQ5H8A4 983 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 TREML2Q5T2D2 321 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 TSHZ1Q6ZSZ6 1077 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 ZBTB8OSQ8IWT0 167 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 KLHL32Q96NJ5 620 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 FERMT1Q9BQL6 677 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 AS3MTQ9HBK9 375 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 DTLQ9NZJ0 730 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 MAGED2Q9UNF1 606 aaPredicted RBP18.19■□□□□ 0.5
VHL-202ENST00000345392 TRIP11Q15643 1979 aa18.19■□□□□ 0.5
VHL-202ENST00000345392 G3V2L1 256 aa18.18■□□□□ 0.5
VHL-202ENST00000345392 NFKBIEO00221 500 aa18.18■□□□□ 0.5
VHL-202ENST00000345392 ZSCAN9O15535 394 aaPredicted RBP18.18■□□□□ 0.5
VHL-202ENST00000345392 PGGT1BP53609 377 aa18.18■□□□□ 0.5
VHL-202ENST00000345392 EMP3P54852 163 aa18.18■□□□□ 0.5
VHL-202ENST00000345392 LSM12Q3MHD2 195 aaKnown RBP18.18■□□□□ 0.5
VHL-202ENST00000345392 HSDL1Q3SXM5 330 aa18.18■□□□□ 0.5
VHL-202ENST00000345392 C16orf89Q6UX73 402 aa18.18■□□□□ 0.5
VHL-202ENST00000345392 SNRNP27Q8WVK2 155 aaKnown RBP18.18■□□□□ 0.5
VHL-202ENST00000345392 HTR3CQ8WXA8 447 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms