RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 DDX42Q86XP3 938 aaKnown RBP eCLIP16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 CCDC89Q8N998 374 aa16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 FAM71DQ8N9W8 422 aa16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 LRRN4Q8WUT4 740 aa16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 DDX50Q9BQ39 737 aaKnown RBP16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 DPH5Q9H2P9 285 aa16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 PRDM12Q9H4Q4 367 aa16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 FAM114A2Q9NRY5 505 aa16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 ZNF212Q9UDV6 495 aa16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 LSM7Q9UK45 103 aaKnown RBP16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 SNX24Q9Y343 169 aa16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 MRPS23Q9Y3D9 190 aaKnown RBP16.8■□□□□ 0.28
CEACAM1-202ENST00000344391 REV3LO60673 3130 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 LEFTY2O00292 366 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 PPP1R12AO14974 1030 aaPredicted RBP16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 LINC01565O15544 149 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 ETS1P14921 441 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 CEBPBP17676 345 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 IVDP26440 423 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 RPL21P46778 160 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 GALNT2Q10471 571 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 CUL1Q13616 776 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 BRD3Q15059 726 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 PRKD1Q15139 912 aaPredicted RBP16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 RARS2Q5T160 578 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 AFMIDQ63HM1 303 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 POTEHQ6S545 545 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 ARHGAP12Q8IWW6 846 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 UMODL1-AS1Q8N2C9 162 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 ITFG1Q8TB96 612 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 CCHCR1Q8TD31 782 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 TFB1MQ8WVM0 346 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 IFT81Q8WYA0 676 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 RTP4Q96DX8 246 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 CELF6Q96J87 481 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 LGMNQ99538 433 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 SMG9Q9H0W8 520 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 TTYH1Q9H313 450 aaPredicted RBP16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 PCDH9Q9HC56 1237 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 DONSONQ9NYP3 566 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 CFAP97Q9P2B7 532 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 ASIC3Q9UHC3 531 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 ZNF510Q9Y2H8 683 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 SHROOM3Q8TF72 1996 aa16.79■□□□□ 0.28
CEACAM1-202ENST00000344391 TMEM265A0A087WTH1 108 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 CCDC151A5D8V7 595 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 KCNN4O15554 427 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 IFNB1P01574 187 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 ZSCAN5DPP0CG00 497 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 MYBL2P10244 700 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 MX2P20592 715 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 MLLT1Q03111 559 aaPredicted RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 RABGAP1LQ5R372 815 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 ANKRD54Q6NXT1 300 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 SYCE2Q6PIF2 218 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 GPR149Q86SP6 731 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 FAM217AQ8IXS0 508 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 EIF1ADQ8N9N8 165 aaKnown RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 PRICKLE1Q96MT3 831 aaPredicted RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 BRD8Q9H0E9 1235 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 RETREG1Q9H6L5 497 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 COLQQ9Y215 455 aaPredicted RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 CCL26Q9Y258 94 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 SH3BP1Q9Y3L3 701 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 NUP210Q8TEM1 1887 aaPredicted RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 CHD5Q8TDI0 1954 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 GFRA2O00451 464 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 VAV1P15498 845 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 ADCY8P40145 1251 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 PPIDQ08752 370 aaKnown RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 ADAM15Q13444 863 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 HEATR6Q6AI08 1181 aaKnown RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 FBXO38Q6PIJ6 1188 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 TFAP2DQ7Z6R9 452 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 CIR1Q86X95 450 aaPredicted RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 CFAP52Q8N1V2 620 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 CCNYQ8ND76 341 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 SH3RF2Q8TEC5 729 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 ING5Q8WYH8 240 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 USP13Q92995 863 aaPredicted RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 HDAC11Q96DB2 347 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 ZSWIM3Q96MP5 696 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 SLC39A8Q9C0K1 460 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 NOL6Q9H6R4 1146 aaKnown RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 TDP1Q9NUW8 608 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 GRHL1Q9NZI5 618 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 NFU1Q9UMS0 254 aa16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 ZFP37Q9Y6Q3 630 aaPredicted RBP16.78■□□□□ 0.28
CEACAM1-202ENST00000344391 NYNRINQ9P2P1 1898 aaKnown RBP16.77■□□□□ 0.28
CEACAM1-202ENST00000344391 TRDMT1O14717 391 aaKnown RBP16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 SCAMP3O14828 347 aaKnown RBP16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 ECHS1P30084 290 aa16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 RPL22P35268 128 aaKnown RBP16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 GARSP41250 739 aaKnown RBP16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 MAPKAPK2P49137 400 aa16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 VPS41P49754 854 aa16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 NDST2P52849 883 aa16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 NRLP54845 237 aa16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 CDH4P55283 916 aa16.77■□□□□ 0.27
CEACAM1-202ENST00000344391 RPS24P62847 133 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms