RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 MYLPFQ96A32 169 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 RSRC1Q96IZ7 334 aaKnown RBP15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 AGAP2Q99490 1192 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 TAS2R1Q9NYW7 299 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 IGSF9Q9P2J2 1179 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 VANGL2Q9ULK5 521 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 SCN4AP35499 1836 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 GSC2O15499 205 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 HNRNPCL1O60812 293 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 TPH1P17752 444 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 BDNFP23560 247 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 CDC25CP30307 473 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 ERFP50548 548 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 CLNS1AP54105 237 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 PPP2R5DQ14738 602 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 TIGD5Q53EQ6 642 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 CERCAMQ5T4B2 595 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 GDF6Q6KF10 455 aaPredicted RBP15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 TAF2Q6P1X5 1199 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 FBXO27Q8NI29 283 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 USP33Q8TEY7 942 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 ATP2A3Q93084 1043 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 COLEC11Q9BWP8 271 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 WWP1Q9H0M0 922 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 WDCPQ9H6R7 721 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 TLE6Q9H808 572 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 CNGB3Q9NQW8 809 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 DNAJC16Q9Y2G8 782 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 TRPV2Q9Y5S1 764 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 SF3B1O75533 1304 aaKnown RBP eCLIP15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 GOLGA8TH3BQL2 631 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 GLRA3O75311 464 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 SNNO75324 88 aaPredicted RBP15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 GSRP00390 522 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 TPBGLP0DKB5 382 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 SRGAP2BP0DMP2 458 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 KYAT3Q6YP21 454 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 C4orf50Q6ZRC1 276 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 PDZD4Q76G19 769 aaPredicted RBP15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 C10orf107Q8IVU9 208 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 SMC1BQ8NDV3 1235 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 OR12D3Q9UGF7 316 aa15.25■□□□□ 0.03
VIPAS39-202ENST00000343765 BIRC5O15392 142 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 PLIN3O60664 434 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 NFKB1P19838 968 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 CD68P34810 354 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 RGS2P41220 211 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 BRCC3P46736 316 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 UBAP2LQ14157 1087 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 KPNB1Q14974 876 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 ARL13BQ3SXY8 428 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 KHDC1Q4VXA5 237 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 MBLAC2Q68D91 279 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 RWDD4Q6NW29 188 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 AGMOQ6ZNB7 445 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 CYS1Q717R9 158 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 MFSD3Q96ES6 412 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 TUBB6Q9BUF5 446 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 SIK2Q9H0K1 926 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 CAB39LQ9H9S4 337 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 THAP1Q9NVV9 213 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 INPP5FQ9Y2H2 1132 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 TNPO2O14787 897 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 B3GAT3O94766 335 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 AP2A1O95782 977 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 CHRNA1P02708 482 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 SEMA3BQ13214 749 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 KRT72Q14CN4 511 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 WASHC2DQ5SRD0 308 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 STRA8Q7Z7C7 330 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 CCNJLQ8IV13 435 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 TEX9Q8N6V9 391 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 NTAN1Q96AB6 310 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 SMARCD1Q96GM5 515 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 SLC9A7Q96T83 725 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 AGO3Q9H9G7 860 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 TMEM216Q9P0N5 145 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 NUP205Q92621 2012 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 EIF4E1BA6NMX2 242 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 B2RBV5 119 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 HHLA1C9JL84 531 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 LRIG2O94898 1065 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 JCHAINP01591 159 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 FGF3P11487 239 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 GP5P40197 560 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 SLC1A6P48664 564 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 ZNF157P51786 506 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 PPIDQ08752 370 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 NAA25Q14CX7 972 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 PCLAFQ15004 111 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 HSP90AA5PQ58FG0 334 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 CST9Q5W186 159 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 TAC4Q86UU9 113 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 TNS4Q8IZW8 715 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 TMEM86AQ8N2M4 240 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 DCLK2Q8N568 766 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 TRPV1Q8NER1 839 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms