RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 FAM182AQ5T1J6 154 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 SH3PXD2AQ5TCZ1 1133 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 NCCRP1Q6ZVX7 275 aaPredicted RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 CLEC14AQ86T13 490 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 VSIG10LQ86VR7 867 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 FIBCD1Q8N539 461 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 TRIML2Q8N7C3 387 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 CNTD1Q8N815 330 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 TDRD5Q8NAT2 981 aaKnown RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 PRMT6Q96LA8 375 aaPredicted RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 TBCBQ99426 244 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 ADPGKQ9BRR6 497 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 ANKRD60Q9BZ19 345 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 RAB6CQ9H0N0 254 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 WDR41Q9HAD4 459 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 EIF2B3Q9NR50 452 aaKnown RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 SUCOQ9UBS9 1254 aaKnown RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 IPO11Q9UI26 975 aaKnown RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 PSAT1Q9Y617 370 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 WDR27A2RRH5 827 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 LRRIQ4A6NIV6 560 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 TRIM38O00635 465 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 TBC1D12O60347 775 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 SUPT3HO75486 399 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 SERPINB7O75635 380 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 MICAL2O94851 1124 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 HOXC6P09630 235 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 CCND2P30279 289 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 GP5P40197 560 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 STT3AP46977 705 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 SEZ6Q53EL9 994 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 BOLA3Q53S33 107 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 FAM102AQ5T9C2 384 aaPredicted RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 GPR180Q86V85 440 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 ARNTL2Q8WYA1 636 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 TMEM143Q96AN5 459 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 SGF29Q96ES7 293 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 RMND5BQ96G75 393 aaPredicted RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 LIN28AQ9H9Z2 209 aaKnown RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 SNX15Q9NRS6 342 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 BARX2Q9UMQ3 279 aaPredicted RBP9.89□□□□□ -0.83
HOXA1-201ENST00000343060 HEY1Q9Y5J3 304 aa9.89□□□□□ -0.83
HOXA1-201ENST00000343060 CNTNAP1P78357 1384 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 TRIM64BA6NI03 449 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 MDM4O15151 490 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 HDAC3O15379 428 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 PDGFRBP09619 1106 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ZFXP17010 805 aaPredicted RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 GPD2P43304 727 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 PKNOX1P55347 436 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 TRPC3Q13507 836 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 CYTH1Q15438 398 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 LSM12Q3MHD2 195 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 PPM1JQ5JR12 505 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ARHGEF16Q5VV41 709 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 FAM151AQ8WW52 585 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 RXFP2Q8WXD0 754 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ASB9Q96DX5 294 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 DOK1Q99704 481 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 NAT9Q9BTE0 207 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 RAVER2Q9HCJ3 691 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 JPH1Q9HDC5 661 aaPredicted RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 SLC8A2Q9UPR5 921 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 TDRKHQ9Y2W6 561 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 HEMK1Q9Y5R4 338 aaPredicted RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 PTPRFP10586 1907 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 PSME4Q14997 1843 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 KPNA7A9QM74 516 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 VAPBO95292 243 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 SUPT20HL2P0C7V6 817 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 HSPA1AP0DMV8 641 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 HSPA1BP0DMV9 641 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ZNF12P17014 697 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 TYK2P29597 1187 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 GARSP41250 739 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ACTR2P61160 394 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 RELAQ04206 551 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 PTPN11Q06124 597 aaPredicted RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 C15orf59Q2T9L4 293 aaPredicted RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 SUPT20HL1Q3ZLR7 823 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ZBED5Q49AG3 693 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 GRTP1Q5TC63 336 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 BORCS5Q969J3 196 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 EME1Q96AY2 570 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ISOC1Q96CN7 298 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ITPKCQ96DU7 683 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 COX4I2Q96KJ9 171 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 CPNE1Q99829 537 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 COQ10BQ9H8M1 238 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 CLK4Q9HAZ1 481 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ZBTB26Q9HCK0 441 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 UTP6Q9NYH9 597 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 GTF2IRD1Q9UHL9 959 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 PTBP2Q9UKA9 531 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 CPSF3Q9UKF6 684 aaKnown RBP9.88□□□□□ -0.83
HOXA1-201ENST00000343060 ITGB1BP2Q9UKP3 347 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 RAP2CQ9Y3L5 183 aa9.88□□□□□ -0.83
HOXA1-201ENST00000343060 C9IYK1 514 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 TRIM13O60858 407 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 RGS20O76081 388 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms