RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SCNN1BP51168 640 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ZNF177Q13360 481 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 TAF5Q15542 800 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 NAIF1Q69YI7 327 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 SLC35B2Q8TB61 432 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 SLCO2A1Q92959 643 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 THUMPD3Q9BV44 507 aaKnown RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 CDHR5Q9HBB8 845 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 VTI1BQ9UEU0 232 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 NFS1Q9Y697 457 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 HEATR9A2RTY3 570 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 F5H5T6 163 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 TSPAN3O60637 253 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 SCNN1GP51170 649 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ZNF135P52742 658 aaPredicted RBP7.34□□□□□ -1.23
VCAN-202ENST00000342785 BEX3Q00994 111 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 PPIL2Q13356 520 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 WLSQ5T9L3 541 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 TDRPQ86YL5 185 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 MIEF2Q96C03 454 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 BORCS6Q96GS4 357 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ECSITQ9BQ95 431 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 ZBED2Q9BTP6 218 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 RNF112Q9ULX5 631 aa7.34□□□□□ -1.23
VCAN-202ENST00000342785 NRCAMQ92823 1304 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 PRR5-ARHGAP8B1AHC4 643 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 MRASO14807 208 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 HDAC3O15379 428 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 MGRN1O60291 552 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 RAMP2O60895 175 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 RASSF9O75901 435 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 FAM155BO75949 473 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 ENDOD1O94919 500 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 BPGMP07738 259 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 IRF1P10914 325 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 CRABP2P29373 138 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 AKT1P31749 480 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 ARHGAP8P85298 464 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 FNBP1LQ5T0N5 605 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 THEMIS2Q5TEJ8 643 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 TTC23LQ6PF05 361 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 ALYREFQ86V81 257 aaKnown RBP7.34□□□□□ -1.24
VCAN-202ENST00000342785 MTMR14Q8NCE2 650 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 CSPG4P5Q96PW8 444 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 MRPL45Q9BRJ2 306 aaKnown RBP7.34□□□□□ -1.24
VCAN-202ENST00000342785 LSM7Q9UK45 103 aaKnown RBP7.34□□□□□ -1.24
VCAN-202ENST00000342785 LRRC37A3O60309 1634 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 DUOX1Q9NRD9 1551 aa7.34□□□□□ -1.24
VCAN-202ENST00000342785 ABCC6O95255 1503 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 FAM95CA0A1B0GW59 222 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 A8MUI8 341 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 TMEM63AO94886 807 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 CFHP08603 1231 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 RANBP1P43487 201 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 NOVP48745 357 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 PRKAA2P54646 552 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 TXNRD3NBQ6F5E7 133 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 PMF1Q6P1K2 205 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 FAM117BQ6P1L5 589 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 LMO3Q8TAP4 145 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 RAET1EQ8TD07 263 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 DCUN1D1Q96GG9 259 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 ZNF317Q96PQ6 595 aaPredicted RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 MAN1C1Q9NR34 630 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 PLLPQ9Y342 182 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 NR5A2O00482 541 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 BAIAP3O94812 1187 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 ESRRBO95718 433 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 ADRA1BP35368 520 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 CSE1LP55060 971 aaKnown RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 GDF10P55107 478 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 MRPS22P82650 360 aaKnown RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 OASLQ15646 514 aaKnown RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 MFN1Q8IWA4 741 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 NMD3Q96D46 503 aaKnown RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 NXF3Q9H4D5 531 aaKnown RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 CCDC167Q9P0B6 97 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 CRLS1Q9UJA2 301 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 APPL1Q9UKG1 709 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 BLOC1S6Q9UL45 172 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 ZNF536O15090 1300 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 PRRG1O14668 218 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 BIRC5O15392 142 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 GSC2O15499 205 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 OXCT1P55809 520 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 TBX4P57082 545 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 NFYCQ13952 458 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 FUT11Q495W5 492 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 SCARA3Q6AZY7 606 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 CYP2R1Q6VVX0 501 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 GLIS1Q8NBF1 620 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 LMCD1Q9NZU5 365 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 CROTQ9UKG9 612 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 PLA2G4CQ9UP65 541 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 ALBP02768 609 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 ZNF23P17027 643 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 MRPS5P82675 430 aaKnown RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 ENPEPQ07075 957 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 WASHC5Q12768 1159 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 PCID2Q5JVF3 399 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms