RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ADGRD1Q6QNK2 874 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 ARHGAP12Q8IWW6 846 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 C1orf74Q96LT6 269 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 CYTH2Q99418 400 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 PLAC1Q9HBJ0 212 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 TTLL3Q9Y4R7 772 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 NYNRINQ9P2P1 1898 aaKnown RBP20.52■□□□□ 0.87
RTN1-202ENST00000342503 TRIM43BA6NCK2 446 aa20.51■□□□□ 0.87
RTN1-202ENST00000342503 GMNCA6NCL1 334 aa20.51■□□□□ 0.87
RTN1-202ENST00000342503 DFFAO00273 331 aa20.51■□□□□ 0.87
RTN1-202ENST00000342503 ZBTB24O43167 697 aaPredicted RBP20.51■□□□□ 0.87
RTN1-202ENST00000342503 TIMP1P01033 207 aa20.51■□□□□ 0.87
RTN1-202ENST00000342503 KRT15P19012 456 aa20.51■□□□□ 0.87
RTN1-202ENST00000342503 MSH2P43246 934 aa20.51■□□□□ 0.87
RTN1-202ENST00000342503 TRIP4Q15650 581 aaPredicted RBP20.51■□□□□ 0.87
RTN1-202ENST00000342503 C10orf120Q5SQS8 335 aa20.51■□□□□ 0.87
RTN1-202ENST00000342503 DCAKDQ8WVC6 231 aa20.51■□□□□ 0.87
RTN1-202ENST00000342503 TRIM43Q96BQ3 446 aaPredicted RBP20.51■□□□□ 0.87
RTN1-202ENST00000342503 EBNA1BP2Q99848 306 aaKnown RBP20.51■□□□□ 0.87
RTN1-202ENST00000342503 GORASP1Q9BQQ3 440 aa20.51■□□□□ 0.87
RTN1-202ENST00000342503 PRDM5Q9NQX1 630 aaPredicted RBP20.51■□□□□ 0.87
RTN1-202ENST00000342503 MAGED2Q9UNF1 606 aaPredicted RBP20.51■□□□□ 0.87
RTN1-202ENST00000342503 MRPL42Q9Y6G3 142 aaKnown RBP20.51■□□□□ 0.87
RTN1-202ENST00000342503 APOEP02649 317 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 ZDHHC11BP0C7U3 371 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 MLNP12872 115 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 CSF2RAP15509 400 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 STX2P32856 288 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 KBTBD12Q3ZCT8 623 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 ARHGAP36Q6ZRI8 547 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 PRPF39Q86UA1 669 aaKnown RBP20.5■□□□□ 0.87
RTN1-202ENST00000342503 MIB1Q86YT6 1006 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 SLC39A11Q8N1S5 342 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 MGARPQ8TDB4 240 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 DPF3Q92784 378 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 ZNF558Q96NG5 402 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 CCT8L2Q96SF2 557 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 CLSTN3Q9BQT9 956 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 SLC39A8Q9C0K1 460 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 RC3H2Q9HBD1 1191 aaKnown RBP20.5■□□□□ 0.87
RTN1-202ENST00000342503 MARCH2Q9P0N8 246 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 RSPH14Q9UHP6 348 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 TRHDEQ9UKU6 1024 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 MAD1L1Q9Y6D9 718 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 DOCK4Q8N1I0 1966 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 SLC12A8A0AV02 714 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 NDUFAB1O14561 156 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 SOD2P04179 222 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 GSTA2P09210 222 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 CD68P34810 354 aaPredicted RBP20.5■□□□□ 0.87
RTN1-202ENST00000342503 MPP2Q14168 576 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 SPARCL1Q14515 664 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 TEX44Q53QW1 395 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 UNC5AQ6ZN44 842 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 LZTR1Q8N653 840 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 ATP6V0D2Q8N8Y2 350 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 ANKRD42Q8N9B4 389 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 AGAP3Q96P47 875 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 PRMT1Q99873 361 aaKnown RBP20.5■□□□□ 0.87
RTN1-202ENST00000342503 TTLL2Q9BWV7 592 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 TRABDQ9H4I3 376 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 CCSER2Q9H7U1 834 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 NDFIP2Q9NV92 336 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 MPP6Q9NZW5 540 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 PCDH10Q9P2E7 1040 aa20.5■□□□□ 0.87
RTN1-202ENST00000342503 KIAA1671Q9BY89 1806 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 SEC24AO95486 1093 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 JCHAINP01591 159 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 HMBSP08397 361 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 TUFMP49411 452 aaKnown RBP20.49■□□□□ 0.87
RTN1-202ENST00000342503 HNRNPH2P55795 449 aaKnown RBP20.49■□□□□ 0.87
RTN1-202ENST00000342503 WDR5P61964 334 aaKnown RBP20.49■□□□□ 0.87
RTN1-202ENST00000342503 ZNF33AQ06730 810 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 MS4A13Q5J8X5 152 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 ZNF683Q8IZ20 524 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 ATPAF2Q8N5M1 289 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 RTL3Q8N8U3 475 aaKnown RBP20.49■□□□□ 0.87
RTN1-202ENST00000342503 ZSCAN18Q8TBC5 510 aaPredicted RBP20.49■□□□□ 0.87
RTN1-202ENST00000342503 ZNF473Q8WTR7 871 aaKnown RBP20.49■□□□□ 0.87
RTN1-202ENST00000342503 TSGA13Q96PP4 275 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 VAT1Q99536 393 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 TRIM56Q9BRZ2 755 aaKnown RBP20.49■□□□□ 0.87
RTN1-202ENST00000342503 HERC2P3Q9BVR0 1158 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 UBE2OQ9C0C9 1292 aaKnown RBP20.49■□□□□ 0.87
RTN1-202ENST00000342503 GBA3Q9H227 469 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 KIF9Q9HAQ2 790 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 VANGL2Q9ULK5 521 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 PCDHA11Q9Y5I1 949 aa20.49■□□□□ 0.87
RTN1-202ENST00000342503 PTPRSQ13332 1948 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 A0A1W2PPM1 405 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 WASH4PA8MWX3 477 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 TRDMT1O14717 391 aaKnown RBP20.48■□□□□ 0.87
RTN1-202ENST00000342503 C1QAP02745 245 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 NFKB1P19838 968 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 CCNCP24863 283 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 CCT5P48643 541 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 BTG3Q14201 252 aaPredicted RBP20.48■□□□□ 0.87
RTN1-202ENST00000342503 LRRC14Q15048 493 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 AFMIDQ63HM1 303 aa20.48■□□□□ 0.87
RTN1-202ENST00000342503 ITPRIPL1Q6GPH6 555 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms