RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SLC12A8A0AV02 714 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 BNIP3LO60238 219 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 ENDOD1O94919 500 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 CLTBP09497 229 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 PCK1P35558 622 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 RIPK1Q13546 671 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 TRAF7Q6Q0C0 670 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 CES3Q6UWW8 571 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 TMC7Q7Z402 723 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 ANKLE1Q8NAG6 615 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 BBOF1Q8ND07 529 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 SPOCK2Q92563 424 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 MAML1Q92585 1016 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 PITPNM3Q9BZ71 974 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 WBP1LQ9NX94 342 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 IL1RAPL1Q9NZN1 696 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 EXOC1LA0A1B0GW35 172 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 MFSD11O43934 449 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 GJA1P17302 382 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 KRT15P19012 456 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 GCAP28676 217 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 ETFBP38117 255 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 GABRB2P47870 512 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 PSMD5Q16401 504 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 ZNF697Q5TEC3 545 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 CFAP52Q8N1V2 620 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 ZCCHC9Q8N567 271 aaKnown RBP13.41□□□□□ -0.26
COL18A1-201ENST00000342220 GBP7Q8N8V2 638 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-201ENST00000342220 DQX1Q8TE96 717 aaKnown RBP13.41□□□□□ -0.26
COL18A1-201ENST00000342220 PYROXD1Q8WU10 500 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 BCL7CQ8WUZ0 217 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-201ENST00000342220 TTPALQ9BTX7 342 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 PHACTR1Q9C0D0 580 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 PAK6Q9NQU5 681 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-201ENST00000342220 ANLNQ9NQW6 1124 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 KLHL14Q9P2G3 628 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 DSEQ9UL01 958 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 ERCC2P18074 760 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 PLD1Q13393 1074 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 C7orf61Q8IZ16 206 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 CASP10Q92851 521 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 ATXN7L3BQ96GX2 97 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 NAF1Q96HR8 494 aaKnown RBP13.41□□□□□ -0.26
COL18A1-201ENST00000342220 SPON2Q9BUD6 331 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 CRISPLD1Q9H336 500 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 FAM47DPA6NHR8 397 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 TSPAN3O60637 253 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 RPLP2P05387 115 aaKnown RBP13.41□□□□□ -0.26
COL18A1-201ENST00000342220 BBS12Q6ZW61 710 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 DNAAF3Q8N9W5 541 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 PABPC5Q96DU9 382 aaKnown RBP13.41□□□□□ -0.26
COL18A1-201ENST00000342220 PRDM12Q9H4Q4 367 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 ALG13Q9NP73 1137 aaKnown RBP13.41□□□□□ -0.26
COL18A1-201ENST00000342220 PCMTD2Q9NV79 361 aa13.41□□□□□ -0.26
COL18A1-201ENST00000342220 APOC4-APOC2K7ER74 178 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 APOC2P02655 101 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 HSPA1AP0DMV8 641 aaKnown RBP13.4□□□□□ -0.26
COL18A1-201ENST00000342220 HSPA1BP0DMV9 641 aaKnown RBP13.4□□□□□ -0.26
COL18A1-201ENST00000342220 SAT1P21673 171 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 L1CAMP32004 1257 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 GRIA1P42261 906 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 PRMT2P55345 433 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 DNAJC3Q13217 504 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 RBM23Q86U06 439 aaKnown RBP13.4□□□□□ -0.26
COL18A1-201ENST00000342220 C4orf33Q8N1A6 199 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 CMASQ8NFW8 434 aaPredicted RBP13.4□□□□□ -0.26
COL18A1-201ENST00000342220 FNIP1Q8TF40 1166 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 CASD1Q96PB1 797 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 H3BRJ5 948 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 ALDH3A1P30838 453 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 ADRA1BP35368 520 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 IL9RQ01113 521 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 LMNB2Q03252 620 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 SLC10A2Q12908 348 aaPredicted RBP13.4□□□□□ -0.26
COL18A1-201ENST00000342220 PKN2Q16513 984 aaKnown RBP13.4□□□□□ -0.26
COL18A1-201ENST00000342220 HIF1AQ16665 826 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 NECAB2Q7Z6G3 386 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 TRABD2AQ86V40 505 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 RELL1Q8IUW5 271 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 VPS52Q8N1B4 723 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 TTC13Q8NBP0 860 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 DPF3Q92784 378 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 ERLEC1Q96DZ1 483 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 C11orf49Q9H6J7 331 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 CCSER2Q9H7U1 834 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 ARHGEF3Q9NR81 526 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 GON4LQ3T8J9 2241 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 NUP205Q92621 2012 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 DNALI1O14645 258 aaPredicted RBP13.4□□□□□ -0.26
COL18A1-201ENST00000342220 ATP9BO43861 1147 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 JCHAINP01591 159 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 FYNP06241 537 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 SP100P23497 879 aaPredicted RBP13.4□□□□□ -0.26
COL18A1-201ENST00000342220 CDK7P50613 346 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 PCSK7Q16549 785 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 LRRC38Q5VT99 294 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 PQLC3Q8N755 202 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 SLCO1B3Q9NPD5 702 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms