RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 TMEM215Q68D42 235 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 PLEKHA7Q6IQ23 1121 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 SCYL2Q6P3W7 929 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 TMC6Q7Z403 805 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 CYB5D2Q8WUJ1 264 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 CENPIQ92674 756 aaPredicted RBP19.77■□□□□ 0.76
SYNE4-202ENST00000340477 IGSF8Q969P0 613 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 NTAN1Q96AB6 310 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 ISCUQ9H1K1 167 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 MYO1AQ9UBC5 1043 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 RAD54BQ9Y620 910 aa19.77■□□□□ 0.76
SYNE4-202ENST00000340477 MUC22E2RYF6 1773 aaPredicted RBP19.76■□□□□ 0.75
SYNE4-202ENST00000340477 A0A1W2PQF6 199 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 HRO43593 1189 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 SRGAP2O75044 1071 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 RHOCP08134 193 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 PLEKP08567 350 aaPredicted RBP19.76■□□□□ 0.75
SYNE4-202ENST00000340477 ADRA1BP35368 520 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 NNMTP40261 264 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 HDAC4P56524 1084 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 SRSF5Q13243 272 aaKnown RBP19.76■□□□□ 0.75
SYNE4-202ENST00000340477 ELF2Q15723 593 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 PLEKHG6Q3KR16 790 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 C5orf22Q49AR2 442 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 FSCBQ5H9T9 825 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 C6orf118Q5T5N4 469 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 LAIR1Q6GTX8 287 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 ASCL5Q7RTU5 278 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 SLFN11Q7Z7L1 901 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 C14orf80Q86SX3 495 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 TTC17Q96AE7 1141 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 DNAJC7Q99615 494 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 NCAPGQ9BPX3 1015 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 ZYG11BQ9C0D3 744 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 MUC3BQ9H195 1237 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 ABHD10Q9NUJ1 306 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 SPAG17Q6Q759 2223 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 CKAP5Q14008 2032 aa19.76■□□□□ 0.75
SYNE4-202ENST00000340477 ZFHX2Q9C0A1 2572 aaPredicted RBP19.76■□□□□ 0.75
SYNE4-202ENST00000340477 WASH3PC4AMC7 463 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 MFAP3LO75121 409 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 RNF8O76064 485 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 SRPRAP08240 638 aaKnown RBP19.75■□□□□ 0.75
SYNE4-202ENST00000340477 HOXC13P31276 330 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 AIF1P55008 147 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 ENPP2Q13822 863 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 CCDC122Q5T0U0 273 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 SH3PXD2AQ5TCZ1 1133 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 ALKBH5Q6P6C2 394 aaKnown RBP19.75■□□□□ 0.75
SYNE4-202ENST00000340477 KIAA1324Q6UXG2 1013 aaKnown RBP19.75■□□□□ 0.75
SYNE4-202ENST00000340477 SUMF1Q8NBK3 374 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 RUBCNQ92622 972 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 LMLNQ96KR4 655 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 FBRSQ9HAH7 460 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 ANLNQ9NQW6 1124 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 TMPRSS4Q9NRS4 437 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 ARHGAP20Q9P2F6 1191 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 OR12D3Q9UGF7 316 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 SUN2Q9UH99 717 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 SLC25A13Q9UJS0 675 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 VPS28Q9UK41 221 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 SNX10Q9Y5X0 201 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 MYO15AQ9UKN7 3530 aa19.75■□□□□ 0.75
SYNE4-202ENST00000340477 DOCK4Q8N1I0 1966 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 A0A087X0T9 212 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 AKR1B15C9JRZ8 316 aaPredicted RBP19.74■□□□□ 0.75
SYNE4-202ENST00000340477 MAP3K13O43283 966 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 ZNF217O75362 1048 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 RHOBTB1O94844 696 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 FAM228BP0C875 321 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 GABRG2P18507 467 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 PRKCHP24723 683 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 HOXD11P31277 338 aaPredicted RBP19.74■□□□□ 0.75
SYNE4-202ENST00000340477 ECT2LQ008S8 904 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 NRG1Q02297 640 aaPredicted RBP19.74■□□□□ 0.75
SYNE4-202ENST00000340477 LPAL2Q16609 132 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 KIAA1211LQ6NV74 962 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 RWDD4Q6NW29 188 aaKnown RBP19.74■□□□□ 0.75
SYNE4-202ENST00000340477 SETD3Q86TU7 594 aaPredicted RBP19.74■□□□□ 0.75
SYNE4-202ENST00000340477 CCDC185Q8N715 623 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 KDM1BQ8NB78 822 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 FNIP1Q8TF40 1166 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 ERLEC1Q96DZ1 483 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 RBSNQ9H1K0 784 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 OSBPL2Q9H1P3 480 aa19.74■□□□□ 0.75
SYNE4-202ENST00000340477 PPARGC1AQ9UBK2 798 aaKnown RBP19.74■□□□□ 0.75
SYNE4-202ENST00000340477 PLXND1Q9Y4D7 1925 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 IGLV3-10A0A075B6K4 115 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 DRGXA6NNA5 263 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 I6L893 689 aaPredicted RBP19.73■□□□□ 0.75
SYNE4-202ENST00000340477 AKR1B10O60218 316 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 HLA-EP13747 358 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 NDUFV2P19404 249 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 OR1E1P30953 314 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 EIF4A3P38919 411 aaKnown RBP19.73■□□□□ 0.75
SYNE4-202ENST00000340477 IRAK1P51617 712 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 KRT83P78385 493 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 SCAPQ12770 1279 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 PTPRNQ16849 979 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 ALFQ53S48 1182 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms