RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ALPPL2P10696 532 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 CYP2A7P20853 494 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 RFWD3Q6PCD5 774 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 NLRP9Q7RTR0 991 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 EXOC2Q96KP1 924 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ELAC1Q9H777 363 aaKnown RBP13.1□□□□□ -0.31
LIN54-201ENST00000340417 SPATA6Q9NWH7 488 aaPredicted RBP13.1□□□□□ -0.31
LIN54-201ENST00000340417 AGO1Q9UL18 857 aaKnown RBP13.1□□□□□ -0.31
LIN54-201ENST00000340417 RNF103O00237 685 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ACSL4O60488 711 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ALOX15P16050 662 aaPredicted RBP13.1□□□□□ -0.31
LIN54-201ENST00000340417 TPH1P17752 444 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 TACR2P21452 398 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 TEAD2Q15562 447 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 PHLDB3Q6NSJ2 640 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 VAT1Q99536 393 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ACP6Q9NPH0 428 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 SPASTQ9UBP0 616 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ZNF839A8K0R7 811 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 PDGFRLQ15198 375 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ANKRD20A8PQ5CZ79 823 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 EPS8L1Q8TE68 723 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 MED8Q96G25 268 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 ADAM33Q9BZ11 813 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 EPS15L1Q9UBC2 864 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
LIN54-201ENST00000340417 L3MBTL1Q9Y468 752 aa13.1□□□□□ -0.31
LIN54-201ENST00000340417 NCF1BA6NI72 391 aaPredicted RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 NCF1CA8MVU1 366 aaPredicted RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 DHX15O43143 795 aaKnown RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 OPHN1O60890 802 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 C4BPAP04003 597 aaKnown RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 NCF1P14598 390 aaPredicted RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 CD86P42081 329 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 MAP3K10Q02779 954 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 ANKS6Q68DC2 871 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 FAM43BQ6ZT52 329 aaPredicted RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 FEM1CQ96JP0 617 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 MINDY3Q9H8M7 445 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 WDR41Q9HAD4 459 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 PSD3Q9NYI0 1048 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 VPS51Q9UID3 782 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 TFR2Q9UP52 801 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 GOLGA8RI6L899 631 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 TNNI3P19429 210 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 TRADDQ15628 312 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 FAM187BQ17R55 369 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 EOGTQ5NDL2 527 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 TMCO2Q7Z6W1 182 aaPredicted RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 OR6K2Q8NGY2 324 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 ACTL9Q8TC94 416 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 GTPBP2Q9BX10 602 aaKnown RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 PARD6BQ9BYG5 372 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 FOXP3Q9BZS1 431 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 OGFRQ9NZT2 677 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 APPL1Q9UKG1 709 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 TRIM33Q9UPN9 1127 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 CCDC160A6NGH7 325 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 MYL2P10916 166 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
LIN54-201ENST00000340417 PANX3Q96QZ0 392 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 HNRNPABQ99729 332 aaKnown RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 KXD1Q9BQD3 176 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 ZDHHC4Q9NPG8 344 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 PCMTD2Q9NV79 361 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 INSL5Q9Y5Q6 135 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 DIAPH2O60879 1101 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 INAVAQ3KP66 663 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 UAP1L1Q3KQV9 507 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 LCLAT1Q6UWP7 414 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 ADH5P11766 374 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
LIN54-201ENST00000340417 PHOSPHO2Q8TCD6 241 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 WBP1LQ9NX94 342 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
LIN54-201ENST00000340417 FAM95CA0A1B0GW59 222 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 ZNF500O60304 480 aaPredicted RBP13.08□□□□□ -0.32
LIN54-201ENST00000340417 EDNRBP24530 442 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 RFC1P35251 1148 aaPredicted RBP13.08□□□□□ -0.32
LIN54-201ENST00000340417 AGAP9Q5VTM2 703 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 MCOLN3Q8TDD5 553 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.32
LIN54-201ENST00000340417 B3GNT5Q9BYG0 378 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 LAMTOR5O43504 91 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 LMO2P25791 158 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 ABL2P42684 1182 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 SNAP47Q5SQN1 464 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 LRRC49Q8IUZ0 686 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 FAM71AQ8IYT1 594 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 MAGEC3Q8TD91 643 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 SNRNP25Q9BV90 132 aaKnown RBP13.08□□□□□ -0.32
LIN54-201ENST00000340417 DNAJC16Q9Y2G8 782 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 SPEF2Q9C093 1822 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms