RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 NAPRTQ6XQN6 538 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 SLC15A4Q8N697 577 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 FAM47BQ8NA70 645 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 FAM156AQ8NDB6 213 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 TFAP2CQ92754 450 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 SLCO4A1Q96BD0 722 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 CGREF1Q99674 301 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 SDCBP2Q9H190 292 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 TCF7L2Q9NQB0 619 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 KMT5AQ9NQR1 393 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 KCNH7Q9NS40 1196 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GIN1Q9NXP7 522 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 SLC17A6Q9P2U8 582 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 PTBP2Q9UKA9 531 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 PCDHA11Q9Y5I1 949 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 CDY2AQ9Y6F7 541 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 CDY1Q9Y6F8 540 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 ZNF541Q9H0D2 1346 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GOLGA8QA0A0J9YX86 632 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GOLGA8OA6NCC3 632 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GOLGA8NF8WBI6 632 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GIPC1O14908 333 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 AQP9O43315 295 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 APRTP07741 180 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 PABPC1P11940 636 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GMPRP36959 345 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GRM5P41594 1212 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 SOX10P56693 466 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 NLRP11P59045 1033 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 PMS2P3Q13401 168 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 PPM1JQ5JR12 505 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GPR107Q5VW38 600 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 TMEM214Q6NUQ4 689 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 CYS1Q717R9 158 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 CPSF7Q8N684 471 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 TMEM35BQ8NCS4 154 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 MCUQ8NE86 351 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 TRUB1Q8WWH5 349 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 RTP4Q96DX8 246 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 TCHPQ9BT92 498 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 HGH1Q9BTY7 390 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GBA3Q9H227 469 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 ZNF385DQ9H6B1 395 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 WDR55Q9H6Y2 383 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GOLGB1Q14789 3259 aaKnown RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 H7C0C1 242 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 HNRNPDLO14979 420 aaKnown RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 AKAP10O43572 662 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 EXTL3O43909 919 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 ENDOD1O94919 500 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 KRT3P12035 628 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 TCN1P20061 433 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 FGFR3P22607 806 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 PROZP22891 400 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 S100A1P23297 94 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 ATP5OP48047 213 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 KPNA1P52294 538 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 DMP1Q13316 513 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 RFTN1Q14699 578 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 NR1D2Q14995 579 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 INSCQ1MX18 579 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 RGS21Q2M5E4 152 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 SLC9A4Q6AI14 798 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 HMBOX1Q6NT76 420 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 PIP4P2Q8N4L2 257 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 CERS5Q8N5B7 392 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 PCYOX1LQ8NBM8 494 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 FLAD1Q8NFF5 587 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 ADAM32Q8TC27 787 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 CIB1Q99828 191 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 CALN1Q9BXU9 219 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 ZNF518BQ9C0D4 1074 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 COA1Q9GZY4 146 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 NAA50Q9GZZ1 169 aaKnown RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 XPNPEP3Q9NQH7 507 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 ZNF358Q9NW07 568 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 TJP2Q9UDY2 1190 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 B3GNT3Q9Y2A9 372 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 SIPA1L1O43166 1804 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 KRBA1A5PL33 1030 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 WDR64B1ANS9 1081 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 C9IYK1 514 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 G3V3G9 751 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 KCNN4O15554 427 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 STAM2O75886 525 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 GNAO1P09471 354 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 MCF2P10911 925 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 TBXAS1P24557 533 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 CDH5P33151 784 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 TCF7P36402 384 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 JAG1P78504 1218 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 RHDQ02161 417 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 LSM12Q3MHD2 195 aaKnown RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 XKR9Q5GH70 373 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 MTX3Q5HYI7 312 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 DCAF8Q5TAQ9 597 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 MFSD4BQ5TF39 518 aa9.61□□□□□ -0.87
NECAP1-201ENST00000339754 APOBEC3HQ6NTF7 200 aaKnown RBP9.61□□□□□ -0.87
NECAP1-201ENST00000339754 GPAT2Q6NUI2 795 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms