RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 APOPT1Q96IL0 206 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 WDR83Q9BRX9 315 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 GPR88Q9GZN0 384 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 MKRN2Q9H000 416 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 MAGEF1Q9HAY2 307 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ATP13A2Q9NQ11 1180 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 PARVAQ9NVD7 372 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 CNTN3Q9P232 1028 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 PPME1Q9Y570 386 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 MICAL3Q7RTP6 2002 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 PVALEFA0A1B0GWK0 134 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 E9PMD0 336 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 SOCS2O14508 198 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 MARCH6O60337 910 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 RFPL2O75678 378 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 IL18RAPO95256 599 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 BMP4P12644 408 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 GARTP22102 1010 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 KCNA1Q09470 495 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 CEACAM7Q14002 265 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 EFHC2Q5JST6 749 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ATAD3CQ5T2N8 411 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TMEM236Q5W0B7 351 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 PDPK2PQ6A1A2 396 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 CCBE1Q6UXH8 406 aaPredicted RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 CHSY1Q86X52 802 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 GALNT12Q8IXK2 581 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 REXO1Q8N1G1 1221 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TCAIMQ8N3R3 496 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ZCCHC7Q8N3Z6 543 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 FAM109AQ8N4B1 249 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 OR2T34Q8NGX1 318 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 HM13Q8TCT9 377 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 DNAJC19Q96DA6 116 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TMA16Q96EY4 203 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TXNDC15Q96J42 360 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 GLT1D1Q96MS3 346 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 NECTIN4Q96NY8 510 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 DOK1Q99704 481 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TM9SF2Q99805 663 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 PRRG3Q9BZD7 231 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 ADNPQ9H2P0 1102 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 KCTD10Q9H3F6 313 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 RAD21L1Q9H4I0 556 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 NOL11Q9H8H0 719 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 FARSBQ9NSD9 589 aaKnown RBP9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TOR4AQ9NXH8 423 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 GGA3Q9NZ52 723 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 TMEM216Q9P0N5 145 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 KDM3BQ7LBC6 1761 aa9.87□□□□□ -0.83
PTCHD4-201ENST00000339488 PRSS51A0A1B0GVH4 220 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 COPEO14579 308 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 AP3D1O14617 1153 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 MTSS1O43312 755 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 ZBTB14O43829 449 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 SSX4O60224 188 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 UQCRC1P31930 480 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC26A3P40879 764 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 DPP6P42658 865 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 ARSEP51690 589 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 CAV1Q03135 178 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 TRPC3Q13507 836 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 SMAD1Q15797 465 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 TEX44Q53QW1 395 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 PPP1R26Q5T8A7 1209 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 C16orf46Q6P387 395 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 CCDC60Q8IWA6 550 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 KCNH5Q8NCM2 988 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 SLAIN1Q8ND83 568 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 TTLQ8NG68 377 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 CYGBQ8WWM9 190 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 MARC2Q969Z3 335 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF597Q96LX8 424 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 KCNK16Q96T55 309 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 PCDHB18PQ96TA0 734 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 PCDHAC1Q9H158 963 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 ZBTB3Q9H5J0 574 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 PNPOQ9NVS9 261 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 SMOXQ9NWM0 555 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 SEPT3Q9UH03 358 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 GTPBP10A4D1E9 387 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 PI4K2BG5E9Z4 385 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 CLASP2O75122 1294 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 KRT6AP02538 564 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 AMHP03971 560 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 KRT6BP04259 564 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 CLEC2LP0C7M8 214 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 COX4I1P13073 169 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 CD58P19256 250 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 KRT20P35900 424 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 OCA2Q04671 838 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 PLCL1Q15111 1095 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 UBE3CQ15386 1083 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 TAF5Q15542 800 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 FNBP1LQ5T0N5 605 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 ANKRD22Q5VYY1 191 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 DESI1Q6ICB0 168 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 CYP2R1Q6VVX0 501 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 RHPN2Q8IUC4 686 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms