RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ESYT2A0FGR8 921 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ARGFXA6NJG6 315 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RIMBP2O15034 1052 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 HDAC3O15379 428 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PSTPIP1O43586 416 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 FGFR2P21802 821 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 FGFR4P22455 802 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 TGM1P22735 817 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RCVRNP35243 200 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PRKAA2P54646 552 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 EPHB1P54762 984 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 DCDC1P59894 354 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 CTDSPL2Q05D32 466 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 SF3A3Q12874 501 aaKnown RBP eCLIP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 MORF4L2Q15014 288 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 LPCAT4Q643R3 524 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 SDE2Q6IQ49 451 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 SULF1Q8IWU6 871 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ABTB2Q8N961 1025 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF680Q8NEM1 530 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 DENND1AQ8TEH3 1009 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PHF10Q8WUB8 498 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 SLC13A3Q8WWT9 602 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PMEPA1Q969W9 287 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RILPQ96NA2 401 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 QRSL1Q9H0R6 528 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 LMAN2LQ9H0V9 348 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 TRIT1Q9H3H1 467 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 EDARQ9UNE0 448 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PLA2G4CQ9UP65 541 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 COL3A1P02461 1466 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF804BA4D1E1 1349 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 NCANO14594 1321 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 C10orf71Q711Q0 1435 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 MAGI3Q5TCQ9 1506 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ADCY10Q96PN6 1610 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 A0A1B0GVM2 712 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ZNF98A6NK75 572 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 LDOC1O95751 146 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 CD44P16070 742 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PROZP22891 400 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PIK3R1P27986 724 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 SOX5P35711 763 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 HK2P52789 917 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 AIF1P55008 147 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 EEF1A1P68104 462 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 EEF1A2Q05639 463 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 BNIP3Q12983 259 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 TEX30Q5JUR7 227 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 EEF1A1P5Q5VTE0 462 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 AADACL4Q5VUY2 407 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 OR7E24Q6IFN5 339 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ANKRD26P1Q6NSI1 321 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 C3orf33Q6P1S2 294 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ALKBH5Q6P6C2 394 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 BNC2Q6ZN30 1099 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 NEK8Q86SG6 692 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ZBTB33Q86T24 672 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 COMTD1Q86VU5 262 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 METTL13Q8N6R0 699 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 KCNH5Q8NCM2 988 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PROX1Q92786 737 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 EYA1Q99502 592 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 SLC2A11Q9BYW1 496 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.24□□□□□ -1.734e-6■■□□□ 13.6
NEDD4-201ENST00000338963 WNT8AQ9H1J5 351 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 INTS7Q9NVH2 962 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ERAP1Q9NZ08 941 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 KCND2Q9NZV8 630 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 NDUFAF1Q9Y375 327 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 CYP3A7-CYP3A51PA0A087WV96 503 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 FAM92AA1XBS5 289 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 TMEM191CA6NGB0 347 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 FAM155AB1AL88 458 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 hCG_2039718K7EN88 272 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 TRIM24O15164 1050 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 SNX4O95219 450 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 IL6P05231 212 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 KRT19P08727 400 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 TMEM191BP0C7N4 346 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 ARF4P18085 180 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RFX1P22670 979 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 CYP3A7P24462 503 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 KLRC1P26715 233 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PGDP52209 483 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PRAMEP78395 509 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 IFITM2Q01629 132 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 BFSP2Q13515 415 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PTK6Q13882 451 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 DGKKQ5KSL6 1271 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 FAM83BQ5T0W9 1011 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 CCNYL2Q5T2Q4 361 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 RRM2BQ7LG56 351 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 DYMQ7RTS9 669 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 KRT26Q7Z3Y9 468 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 PRPF39Q86UA1 669 aaKnown RBP4.24□□□□□ -1.73
NEDD4-201ENST00000338963 FBXL6Q8N531 539 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 DEPDC1BQ8WUY9 529 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 AP2M1Q96CW1 435 aa4.24□□□□□ -1.73
NEDD4-201ENST00000338963 SH3YL1Q96HL8 342 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms