RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 DENND2DQ9H6A0 471 aaPredicted RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 MINDY3Q9H8M7 445 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 ALG13Q9NP73 1137 aaKnown RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 RAB6BQ9NRW1 208 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 DPP3Q9NY33 737 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 CLDND1Q9NY35 253 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 MOCS1Q9NZB8 636 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 SAE1Q9UBE0 346 aaPredicted RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 HMGXB4Q9UGU5 601 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 PCSK1NQ9UHG2 260 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 ST3GAL5Q9UNP4 418 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 TRIM33Q9UPN9 1127 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 CAPN14A8MX76 684 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 C9IYK1 514 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 GPR182O15218 404 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 GSC2O15499 205 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 KCNN4O15554 427 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 TSPAN1O60635 241 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 GLRA3O75311 464 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 GPR32O75388 356 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 SMNDC1O75940 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
RTN3-201ENST00000338850 CBX6O95503 412 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 VTNP04004 478 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ITGB1P05556 798 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 PYGBP11216 843 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 CCDC130P13994 396 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ARF4P18085 180 aaPredicted RBP11.08□□□□□ -0.64
RTN3-201ENST00000338850 DNAJB1P25685 340 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 EPHB2P29323 1055 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
RTN3-201ENST00000338850 VHLP40337 213 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 CLCN3P51790 818 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 BCAT1P54687 386 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 CDH8P55286 799 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ADCY1Q08828 1119 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ZBTB6Q15916 424 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 TMEM132AQ24JP5 1023 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 GOLGA7BQ2TAP0 167 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ARMC3Q5W041 872 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 CAPN12Q6ZSI9 719 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 EP400NLQ6ZTU2 488 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 BNIPLQ7Z465 357 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ADGRG6Q86SQ4 1221 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 TMPRSS6Q8IU80 811 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 GJD3Q8N144 294 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 CRYBG2Q8N1P7 616 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 KLHL23Q8NBE8 558 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 RFWD2Q8NHY2 731 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 SPPL3Q8TCT6 385 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 E2F7Q96AV8 911 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 FAM111AQ96PZ2 611 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 PPP1R16BQ96T49 567 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ADAM2Q99965 735 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 PLAC1Q9HBJ0 212 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 GPAMQ9HCL2 828 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 RGS18Q9NS28 235 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 STX18Q9P2W9 335 aaKnown RBP11.08□□□□□ -0.64
RTN3-201ENST00000338850 HEY2Q9UBP5 337 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 HESX1Q9UBX0 185 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ZNF212Q9UDV6 495 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ADAM28Q9UKQ2 775 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 LRFN2Q9ULH4 789 aa11.08□□□□□ -0.64
RTN3-201ENST00000338850 ATG2AQ2TAZ0 1938 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 A0A0A0MRY4 1105 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 A6NHS1 94 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 FCHO1O14526 889 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 OPHN1O60890 802 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 CSPG5O95196 566 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 BPGMP07738 259 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 SERPINA6P08185 405 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 ALOX15P16050 662 aaPredicted RBP11.07□□□□□ -0.64
RTN3-201ENST00000338850 GM2AP17900 193 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 IBSPP21815 317 aaPredicted RBP11.07□□□□□ -0.64
RTN3-201ENST00000338850 CYP2F1P24903 491 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 RBL1P28749 1068 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 AXLP30530 894 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 PNPLA4P41247 253 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 GLUD2P49448 558 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 HDAC4P56524 1084 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 DLX2Q07687 328 aaPredicted RBP11.07□□□□□ -0.64
RTN3-201ENST00000338850 NIPAL4Q0D2K0 466 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 BST2Q10589 180 aaKnown RBP11.07□□□□□ -0.64
RTN3-201ENST00000338850 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 DSC3Q14574 896 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 TAF5Q15542 800 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 TAF11Q15544 211 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 TRMT5Q32P41 509 aaKnown RBP11.07□□□□□ -0.64
RTN3-201ENST00000338850 HP1BP3Q5SSJ5 553 aaPredicted RBP11.07□□□□□ -0.64
RTN3-201ENST00000338850 IRGCQ6NXR0 463 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 UNC5AQ6ZN44 842 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 SLC24A5Q71RS6 500 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 NET1Q7Z628 596 aaPredicted RBP11.07□□□□□ -0.64
RTN3-201ENST00000338850 FAM172AQ8WUF8 416 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 CDKL2Q92772 493 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 SNX27Q96L92 541 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 SPATA13Q96N96 652 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 FERMT1Q9BQL6 677 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 LRFN3Q9BTN0 628 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 ADAMTS10Q9H324 1103 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms