RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 COPAP53621 1224 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 UBASH3AP57075 661 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 SHC2P98077 582 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 MTA1Q13330 715 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 CDH18Q13634 790 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 FIGNQ5HY92 759 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 PITRM1Q5JRX3 1037 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 SH3PXD2AQ5TCZ1 1133 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 PMS2CLQ68D20 193 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 CXorf57Q6NSI4 855 aaKnown RBP15.75■□□□□ 0.11
PRKN-201ENST00000338468 SERPINA13PQ6UXR4 307 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 ZNF571Q7Z3V5 609 aaPredicted RBP15.75■□□□□ 0.11
PRKN-201ENST00000338468 APCDD1Q8J025 514 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 PGBD3Q8N328 593 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 OR52K2Q8NGK3 314 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 RXFP2Q8WXD0 754 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 MRGPRX3Q96LB0 322 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 EDEM3Q9BZQ6 932 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 SIK2Q9H0K1 926 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 ARRDC1-AS1Q9H2J1 176 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 SEPT11Q9NVA2 429 aaKnown RBP15.75■□□□□ 0.11
PRKN-201ENST00000338468 FAM208BQ5VWN6 2430 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 A0A1B0GVM2 712 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 TCAF2A6NFQ2 919 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 H0Y626 953 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 CCDC172P0C7W6 258 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 C7P10643 843 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 POLR2EP19388 210 aaKnown RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 RFC1P35251 1148 aaPredicted RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 CTSOP43234 321 aaPredicted RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 TPM4P67936 248 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 ATP11AP98196 1134 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 CAMK2GQ13555 558 aaPredicted RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 STARD3Q14849 445 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 SF3A2Q15428 464 aaKnown RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 CCDC6Q16204 474 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 ASIC2Q16515 512 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 C15orf59Q2T9L4 293 aaPredicted RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 PLEKHG6Q3KR16 790 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 PPP1R15BQ5SWA1 713 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 N4BP2L1Q5TBK1 243 aaPredicted RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 TTC39BQ5VTQ0 682 aaPredicted RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 ACAD10Q6JQN1 1059 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 C11orf74Q86VG3 221 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 MCOLN2Q8IZK6 566 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 ZNF366Q8N895 744 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 C3orf20Q8ND61 904 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 CENPIQ92674 756 aaPredicted RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 ALG14Q96F25 216 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 RPRD1AQ96P16 312 aaPredicted RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 HAUS4Q9H6D7 363 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 KIAA1522Q9P206 1035 aaPredicted RBP15.74■□□□□ 0.11
PRKN-201ENST00000338468 PLA2G4CQ9UP65 541 aa15.74■□□□□ 0.11
PRKN-201ENST00000338468 IGHV1OR15-9A0A0B4J2B8 117 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 SIGLEC16A6NMB1 481 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 DRGXA6NNA5 263 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 GOLGA6L19H0YKK7 550 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 CNTN5O94779 1100 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 RHOBTB1O94844 696 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 CALB1P05937 261 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 ATP5BP06576 529 aaKnown RBP15.73■□□□□ 0.11
PRKN-201ENST00000338468 EPHX1P07099 455 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 KRT3P12035 628 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 PDGFRAP16234 1089 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 MZF1P28698 734 aaPredicted RBP15.73■□□□□ 0.11
PRKN-201ENST00000338468 PTPN9P43378 593 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 E2F5Q15329 346 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 NFKBIBQ15653 356 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 ELF2Q15723 593 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 FNDC3BQ53EP0 1204 aaKnown RBP15.73■□□□□ 0.11
PRKN-201ENST00000338468 ALFQ53S48 1182 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 RABGAP1LQ5R372 815 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 PLA2G2CQ5R387 149 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 SFMBT2Q5VUG0 894 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 WDR59Q6PJI9 974 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 SND1Q7KZF4 910 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRKN-201ENST00000338468 FAM131BQ86XD5 332 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 DNAAF5Q86Y56 855 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 C1orf74Q96LT6 269 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 MTG2Q9H4K7 406 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 IFNKQ9P0W0 207 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 OR51B4Q9Y5P0 310 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 TNRC6BQ9UPQ9 1833 aaKnown RBP15.73■□□□□ 0.11
PRKN-201ENST00000338468 THADAQ6YHU6 1953 aa15.73■□□□□ 0.11
PRKN-201ENST00000338468 IGLV3-10A0A075B6K4 115 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 A0A1W2PQJ5 194 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 BCLAF3A2AJT9 711 aaKnown RBP15.72■□□□□ 0.11
PRKN-201ENST00000338468 DDX3XO00571 662 aaKnown RBP eCLIP15.72■□□□□ 0.114e-14■■■■□ 23.3
PRKN-201ENST00000338468 SYNCRIPO60506 623 aaKnown RBP15.72■□□□□ 0.11
PRKN-201ENST00000338468 ASLP04424 464 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 ZNF806P0C7X5 589 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 SKILP12757 684 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 TNFAIP3P21580 790 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 RRM1P23921 792 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 SDC4P31431 198 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 NUMBP49757 651 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 PLK1P53350 603 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 HDAC4P56524 1084 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 CDO1Q16878 200 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms