RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 COX16Q9P0S2 106 aa11.59□□□□□ -0.55
C9orf85-201ENST00000334731 CEP83Q9Y592 693 aa11.59□□□□□ -0.55
C9orf85-201ENST00000334731 CNOT1A5YKK6 2376 aaKnown RBP11.59□□□□□ -0.55
C9orf85-201ENST00000334731 M0QYT0 321 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 GNSP15586 552 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 MATKP42679 507 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 CTSOP43234 321 aaPredicted RBP11.58□□□□□ -0.56
C9orf85-201ENST00000334731 KLK7P49862 253 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 RNASE9P60153 205 aaKnown RBP11.58□□□□□ -0.56
C9orf85-201ENST00000334731 ST8SIA6P61647 398 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 NME3Q13232 169 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 MTA1Q13330 715 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 AUHQ13825 339 aaKnown RBP11.58□□□□□ -0.56
C9orf85-201ENST00000334731 ARID5BQ14865 1188 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 HNRNPA1L2Q32P51 320 aaKnown RBP11.58□□□□□ -0.56
C9orf85-201ENST00000334731 PLEKHG6Q3KR16 790 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 SH3PXD2AQ5TCZ1 1133 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 DCAF12L1Q5VU92 463 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 OTUD1Q5VV17 481 aaPredicted RBP11.58□□□□□ -0.56
C9orf85-201ENST00000334731 TAF3Q5VWG9 929 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 DMRTA1Q5VZB9 504 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 NOP9Q86U38 636 aaKnown RBP11.58□□□□□ -0.56
C9orf85-201ENST00000334731 ERICH1Q86X53 443 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 APCDD1Q8J025 514 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 CCAR2Q8N163 923 aaKnown RBP11.58□□□□□ -0.56
C9orf85-201ENST00000334731 NT5C3BQ969T7 300 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 C18orf8Q96DM3 657 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 CNTNAP3BQ96NU0 1288 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 NPY6RQ99463 290 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 GTPBP2Q9BX10 602 aaKnown RBP11.58□□□□□ -0.56
C9orf85-201ENST00000334731 ADAM33Q9BZ11 813 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 CNTNAP3Q9BZ76 1288 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 RSPH9Q9H1X1 276 aaPredicted RBP11.58□□□□□ -0.56
C9orf85-201ENST00000334731 FANCLQ9NW38 375 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 SUSD2Q9UGT4 822 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 SLCO3A1Q9UIG8 710 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 ERVW-1Q9UQF0 538 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 GON4LQ3T8J9 2241 aa11.58□□□□□ -0.56
C9orf85-201ENST00000334731 PLXND1Q9Y4D7 1925 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 MEI4A8MW99 385 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 TTC34A8MYJ7 566 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 F8VZ95 297 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 SIN3BO75182 1162 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 PAGE1O75459 146 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 MOCS3O95396 460 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 SRPRAP08240 638 aaKnown RBP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 SYPP08247 313 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 CEACAM1P13688 526 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 TFE3P19532 575 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 PMLP29590 882 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 ACSL1P33121 698 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 CXCR3P49682 368 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 PLK1P53350 603 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 ATXN3P54252 364 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 ECT2LQ008S8 904 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 SEMA3BQ13214 749 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 C9orf64Q5T6V5 341 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 TTC39BQ5VTQ0 682 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 ZNF776Q68DI1 518 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 ADGRD1Q6QNK2 874 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 SASS6Q6UVJ0 657 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 C14orf80Q86SX3 495 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 CIR1Q86X95 450 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 XYLT1Q86Y38 959 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 DHX40Q8IX18 779 aaKnown RBP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 OR2I1PQ8NGU4 316 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 C1orf216Q8TAB5 229 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 IGSF8Q969P0 613 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 MIR1-1HGQ9H1L0 117 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 PCED1AQ9H1Q7 454 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 GANQ9H2C0 597 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 C6orf106Q9H6K1 298 aaPredicted RBP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 PIGVQ9NUD9 493 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 DNAAF2Q9NVR5 837 aaKnown RBP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 ANO10Q9NW15 660 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 RRN3Q9NYV6 651 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.57□□□□□ -0.56
C9orf85-201ENST00000334731 HS3ST4Q9Y661 456 aa11.57□□□□□ -0.56
C9orf85-201ENST00000334731 A0A1B0GTW7 788 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 A0A1B0GVM2 712 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 FAM170AA1A519 330 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 TARSL2A2RTX5 802 aaKnown RBP11.56□□□□□ -0.56
C9orf85-201ENST00000334731 TCAF2A6NFQ2 919 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 UPK3BL1B0FP48 263 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 UPK3BL2E5RIL1 263 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 I6L893 689 aaPredicted RBP11.56□□□□□ -0.56
C9orf85-201ENST00000334731 EPHB6O15197 1021 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 BCAT2O15382 392 aaPredicted RBP11.56□□□□□ -0.56
C9orf85-201ENST00000334731 OPHN1O60890 802 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 ADCY5O95622 1261 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 LSM8O95777 96 aaKnown RBP11.56□□□□□ -0.56
C9orf85-201ENST00000334731 DNTTP04053 509 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 MMEP08473 750 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 PDGFRAP16234 1089 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 MZF1P28698 734 aaPredicted RBP11.56□□□□□ -0.56
C9orf85-201ENST00000334731 SCNN1AP37088 669 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 IRAK1P51617 712 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 POLR2FP61218 127 aaKnown RBP11.56□□□□□ -0.56
C9orf85-201ENST00000334731 SLC12A1Q13621 1099 aa11.56□□□□□ -0.56
C9orf85-201ENST00000334731 C5orf22Q49AR2 442 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms