RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 TREHO43280 583 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 CIB2O75838 187 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 ERCC2P18074 760 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 ADRA1BP35368 520 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 INSCQ1MX18 579 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 NET1Q7Z628 596 aaPredicted RBP23.96■■□□□ 1.43
NDEL1-201ENST00000334527 PLEKHH3Q7Z736 793 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 SMG8Q8ND04 991 aaKnown RBP23.96■■□□□ 1.43
NDEL1-201ENST00000334527 PPP4R1Q8TF05 950 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 BRI3BPQ8WY22 251 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 KRT82Q9NSB4 513 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 CORO1CQ9ULV4 474 aaPredicted RBP23.96■■□□□ 1.43
NDEL1-201ENST00000334527 SORCS3Q9UPU3 1222 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 TSC2P49815 1807 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 PTPN3P26045 913 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 GRTP1Q5TC63 336 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 CAPRIN2Q6IMN6 1127 aaKnown RBP23.96■■□□□ 1.43
NDEL1-201ENST00000334527 LENG1Q96BZ8 264 aaPredicted RBP23.96■■□□□ 1.43
NDEL1-201ENST00000334527 GORASP1Q9BQQ3 440 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 STN1Q9H668 368 aaKnown RBP23.96■■□□□ 1.43
NDEL1-201ENST00000334527 COPG2Q9UBF2 871 aa23.96■■□□□ 1.43
NDEL1-201ENST00000334527 APOBEC2Q9Y235 224 aaKnown RBP23.96■■□□□ 1.43
NDEL1-201ENST00000334527 F8W8V4 182 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 FYNP06241 537 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 IGFBP6P24592 240 aaPredicted RBP23.95■■□□□ 1.43
NDEL1-201ENST00000334527 GRK2P25098 689 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 GTF2A2P52657 109 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 KIAA0319Q5VV43 1072 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 ATG14Q6ZNE5 492 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 CMC1Q7Z7K0 106 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 ZNF669Q96BR6 464 aaPredicted RBP23.95■■□□□ 1.43
NDEL1-201ENST00000334527 SPDL1Q96EA4 605 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 ATXN7L3BQ96GX2 97 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 SORT1Q99523 831 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 ULBP1Q9BZM6 244 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 C1orf21Q9H246 121 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 LRRC40Q9H9A6 602 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 SNX15Q9NRS6 342 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 PNPOQ9NVS9 261 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 WASF2Q9Y6W5 498 aa23.95■■□□□ 1.43
NDEL1-201ENST00000334527 MEI4A8MW99 385 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 FAM200BP0CF97 657 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 RABGAP1LQ5R372 815 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 C6orf163Q5TEZ5 329 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 RIPOR1Q6ZS17 1223 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 DCLK2Q8N568 766 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 PANX3Q96QZ0 392 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 ANLNQ9NQW6 1124 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 ZNF358Q9NW07 568 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 ZNF212Q9UDV6 495 aa23.95■■□□□ 1.42
NDEL1-201ENST00000334527 C6orf222P0C671 652 aaPredicted RBP23.94■■□□□ 1.42
NDEL1-201ENST00000334527 MX2P20592 715 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 TPI1P60174 286 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 ADAM17P78536 824 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 TRMT5Q32P41 509 aaKnown RBP23.94■■□□□ 1.42
NDEL1-201ENST00000334527 DPY19L2Q6NUT2 758 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 PDZD4Q76G19 769 aaPredicted RBP23.94■■□□□ 1.42
NDEL1-201ENST00000334527 MAVSQ7Z434 540 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.94■■□□□ 1.42
NDEL1-201ENST00000334527 SLC7A8Q9UHI5 535 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 VANGL2Q9ULK5 521 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 YJEFN3A6XGL0 299 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 PTGESO14684 152 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 AP2A1O95782 977 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 RALBP11234 206 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 DNAAF3Q8N9W5 541 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 ZFP42Q96MM3 310 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 SLC9A7Q96T83 725 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 RBBP8Q99708 897 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 CACNG4Q9UBN1 327 aa23.94■■□□□ 1.42
NDEL1-201ENST00000334527 A6NHS1 94 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 I6L893 689 aaPredicted RBP23.93■■□□□ 1.42
NDEL1-201ENST00000334527 AMHP03971 560 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 LRPAP1P30533 357 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 ARRB2P32121 409 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 ERFP50548 548 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 ZRSR2Q15696 482 aaKnown RBP23.93■■□□□ 1.42
NDEL1-201ENST00000334527 STRA8Q7Z7C7 330 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 PPFIBP2Q8ND30 876 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 WDR6Q9NNW5 1121 aaKnown RBP23.93■■□□□ 1.42
NDEL1-201ENST00000334527 DDX43Q9NXZ2 648 aaKnown RBP23.93■■□□□ 1.42
NDEL1-201ENST00000334527 BFARQ9NZS9 450 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 SOX13Q9UN79 622 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 GNEQ9Y223 722 aaKnown RBP23.93■■□□□ 1.42
NDEL1-201ENST00000334527 TRIP12Q14669 1992 aaPredicted RBP23.93■■□□□ 1.42
NDEL1-201ENST00000334527 GABRDO14764 452 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 KLHL2O95198 593 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 F7P08709 466 aaPredicted RBP23.93■■□□□ 1.42
NDEL1-201ENST00000334527 CPA3P15088 417 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 IDH3AP50213 366 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 SERPINB8P50452 374 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 ABCE1P61221 599 aaKnown RBP23.93■■□□□ 1.42
NDEL1-201ENST00000334527 ITGA9Q13797 1035 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 TWF2Q6IBS0 349 aaKnown RBP23.93■■□□□ 1.42
NDEL1-201ENST00000334527 RSPH3Q86UC2 560 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 TLK2Q86UE8 772 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 AZIN2Q96A70 460 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 NTAN1Q96AB6 310 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 CRTAC1Q9NQ79 661 aa23.93■■□□□ 1.42
NDEL1-201ENST00000334527 ADAM28Q9UKQ2 775 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms