RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 DOK6Q6PKX4 331 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 C7orf43Q8WVR3 580 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 SEC16BQ96JE7 1060 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 CERS4Q9HA82 394 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.33■□□□□ 0.04
C9orf47-201ENST00000334490 NCKIPSDQ9NZQ3 722 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 CACHD1Q5VU97 1274 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 FUT10Q6P4F1 479 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 LCLAT1Q6UWP7 414 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 SYTL1Q8IYJ3 562 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 ANKRD7Q92527 254 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 FCRL2Q96LA5 508 aaPredicted RBP15.32■□□□□ 0.04
C9orf47-201ENST00000334490 KCNK16Q96T55 309 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 SELENONQ9NZV5 590 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 ARL5CA6NH57 179 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 CILPO75339 1184 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 DAB1O75553 588 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 TCN1P20061 433 aaPredicted RBP15.32■□□□□ 0.04
C9orf47-201ENST00000334490 ATP4AP20648 1035 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 CD86P42081 329 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 IRAK1P51617 712 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 ATXN3P54252 364 aaPredicted RBP15.32■□□□□ 0.04
C9orf47-201ENST00000334490 GALNTL6Q49A17 601 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 TTC7BQ86TV6 843 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 TDRD5Q8NAT2 981 aaKnown RBP15.32■□□□□ 0.04
C9orf47-201ENST00000334490 HDAC7Q8WUI4 952 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 PPP1R16AQ96I34 528 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 L1RE1Q9UN81 338 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 SPACA6W5XKT8 324 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 GUCA1CO95843 209 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 CCNB1P14635 433 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 SETD3Q86TU7 594 aaPredicted RBP15.32■□□□□ 0.04
C9orf47-201ENST00000334490 PRPF39Q86UA1 669 aaKnown RBP15.32■□□□□ 0.04
C9orf47-201ENST00000334490 CREG2Q8IUH2 290 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 THTPAQ9BU02 230 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 CAPN10Q9HC96 672 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 OR56A5P0C7T3 313 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 HPCAP84074 193 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 PLIN5Q00G26 463 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 POM121L1PQ3SYA9 428 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 SPANXN3Q5MJ09 141 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 PSTKQ8IV42 348 aaKnown RBP15.32■□□□□ 0.04
C9orf47-201ENST00000334490 NPLOC4Q8TAT6 608 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 ETNK2Q9NVF9 386 aa15.32■□□□□ 0.04
C9orf47-201ENST00000334490 THOP1P52888 689 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 RGL4Q8IZJ4 473 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 JOSD2Q8TAC2 188 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 KCNV2Q8TDN2 545 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 SMG7Q92540 1137 aaKnown RBP15.31■□□□□ 0.04
C9orf47-201ENST00000334490 FAR2Q96K12 515 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 C1QTNF7Q9BXJ2 289 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 WDR41Q9HAD4 459 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 BUD23O43709 281 aaKnown RBP15.31■□□□□ 0.04
C9orf47-201ENST00000334490 KRT16P08779 473 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 ATP6V1E1P36543 226 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 MARCKSL1P49006 195 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 MYCBPAPQ8TBZ2 947 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 SKA1Q96BD8 255 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 PHF21BQ96EK2 531 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 SEMA3CQ99985 751 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 ELOVL6Q9H5J4 265 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 NID2Q14112 1375 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 ACRP10323 421 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 LILRA4P59901 499 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 ACBD5Q5T8D3 534 aaPredicted RBP15.31■□□□□ 0.04
C9orf47-201ENST00000334490 C16orf89Q6UX73 402 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 KIAA1324Q6UXG2 1013 aaKnown RBP15.31■□□□□ 0.04
C9orf47-201ENST00000334490 TRPM8Q7Z2W7 1104 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 JADE3Q92613 823 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 ZNF670Q9BS34 389 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 MLPHQ9BV36 600 aaPredicted RBP15.31■□□□□ 0.04
C9orf47-201ENST00000334490 FUT8Q9BYC5 575 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 LHX5Q9H2C1 402 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 CHCHD3Q9NX63 227 aaKnown RBP15.31■□□□□ 0.04
C9orf47-201ENST00000334490 ZNF112Q9UJU3 913 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 DLG5Q8TDM6 1919 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 MYO1CO00159 1063 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 RIPK2O43353 540 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 ARIH2O95376 493 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 NFKB1P19838 968 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 CPA2P48052 419 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 GPR158Q5T848 1215 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 LRRC34Q8IZ02 419 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 OR52K1Q8NGK4 314 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 RSPH1Q8WYR4 309 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 USP6NLQ92738 828 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 C17orf80Q9BSJ5 609 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 CCDC90BQ9GZT6 254 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 TMEM161AQ9NX61 479 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 PHTF1Q9UMS5 762 aa15.31■□□□□ 0.04
C9orf47-201ENST00000334490 CYP3A5P20815 502 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 MAPK8P45983 427 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 NEPROQ6NW34 567 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 CHPFQ8IZ52 775 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 EXOC2Q96KP1 924 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 CPXM1Q96SM3 734 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 MPP6Q9NZW5 540 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.3■□□□□ 0.04
C9orf47-201ENST00000334490 A0A1W2PQH9 124 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms