RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ST8SIA6P61647 398 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 OVGP1Q12889 678 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 MPP3Q13368 585 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 VEPH1Q14D04 833 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 N4BP2L1Q5TBK1 243 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 MACC1Q6ZN28 852 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ENGASEQ8NFI3 743 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 NUP50Q9UKX7 468 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ABCC3O15438 1527 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PIGBOS1A0A0B4J2F0 54 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 A0A1W2PQ72 361 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PARNO95453 639 aaKnown RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 COX4I1P13073 169 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 GSSP48637 474 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 FOLH1Q04609 750 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF746Q6NUN9 644 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PLCZ1Q86YW0 608 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 SULF1Q8IWU6 871 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 DCP1BQ8IZD4 617 aaKnown RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 FBXL16Q8N461 479 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF557Q8N988 423 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ACSBG1Q96GR2 724 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 RIT2Q99578 217 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 MED28Q9H204 178 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CMTM6Q9NX76 183 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CHORDC1Q9UHD1 332 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 IKZF3Q9UKT9 509 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 SUPT7LO94864 414 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 FEN1P39748 380 aaKnown RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 MMP13P45452 471 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CNSTQ6PJW8 725 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PLET1Q6UQ28 207 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PTF1AQ7RTS3 328 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF540Q8NDQ6 660 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ROPN1LQ96C74 230 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 RMDN3Q96TC7 470 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PLA2G12BQ9BX93 195 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 DPY30Q9C005 99 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 SENP6Q9GZR1 1112 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CLPBQ9H078 707 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ANKEF1Q9NU02 776 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 NRXN1Q9ULB1 1477 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ASB14A6NK59 587 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CST8O60676 142 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 GYS1P13807 737 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PON1P27169 355 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 YWHAZP63104 245 aaKnown RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 KCTD21Q4G0X4 260 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 DNAJB8Q8NHS0 232 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 TMC2Q8TDI7 906 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CCDC177Q9NQR7 707 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 GPRC5DQ9NZD1 345 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 LEF1Q9UJU2 399 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ZW10O43264 779 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PROSCO94903 275 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ITGALP20701 1170 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 AKR1D1P51857 326 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 DRG2P55039 364 aaKnown RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ELP6Q0PNE2 266 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 DQX1Q8TE96 717 aaKnown RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 UTP15Q8TED0 518 aaKnown RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ZFAND2BQ8WV99 257 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 TMEM47Q9BQJ4 181 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 COPS7BQ9H9Q2 264 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 AGPAT5Q9NUQ2 364 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 QSOX1O00391 747 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ERBB2P04626 1255 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 TIE1P35590 1138 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 KATNAL2Q8IYT4 538 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 NELL1Q92832 810 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 TAS2R7Q9NYW3 318 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 AP4B1Q9Y6B7 739 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF879B4DU55 563 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 HMBSP08397 361 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 NCOA4Q13772 614 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PLCL1Q15111 1095 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 SLCO6A1Q86UG4 719 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ADGRF4Q8IZF3 695 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CHP1Q99653 195 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 TRMOQ9BU70 441 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 APOL5Q9BWW9 433 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 LGR6Q9HBX8 967 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CD320Q9NPF0 282 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 DYRK1BQ9Y463 629 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PCDHA11Q9Y5I1 949 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 INPP4BO15327 924 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 STOMP27105 288 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CDK9P50750 372 aaKnown RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 MFSD5Q6N075 450 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ERICH5Q6P6B1 374 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 MUC3BQ9H195 1237 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 RCOR3Q9P2K3 495 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 SEC14L4Q9UDX3 406 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 PCDHA3Q9Y5H8 950 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 LMTK2Q8IWU2 1503 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 LMTK3Q96Q04 1460 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CLDN25C9JDP6 229 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 STX16-NPEPL1H3BU86 382 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 STX16O14662 325 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms