RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PIAS2O75928 621 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 DDHD2O94830 711 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 CLDN14O95500 239 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 GSRP00390 522 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 CRYABP02511 175 aaKnown RBP1.65□□□□□ -2.14
LINC00643-201ENST00000334389 H2AFB1P0C5Y9 115 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 H2AFB2P0C5Z0 115 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 ODC1P11926 461 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 PCMT1P22061 227 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 GUCY2CP25092 1073 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 KIF5BP33176 963 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 RBMXP38159 391 aaKnown RBP1.65□□□□□ -2.14
LINC00643-201ENST00000334389 LHX1P48742 406 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 GALK1P51570 392 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF131P52739 623 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 NR1H2P55055 460 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 PSMC5P62195 406 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 IRX4P78413 519 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 ROR1Q01973 937 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 CLCA4Q14CN2 919 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 GPR157Q5UAW9 335 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 SPATA1Q5VX52 437 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 FOXB2Q5VYV0 432 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 GRAMD4Q6IC98 578 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 IQCEQ6IPM2 695 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 FAM111BQ6SJ93 734 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 BNIPLQ7Z465 357 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 SLFN12Q8IYM2 578 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 MYOCDQ8IZQ8 938 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 SYT2Q8N9I0 419 aaPredicted RBP1.65□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF548Q8NEK5 533 aaPredicted RBP1.65□□□□□ -2.14
LINC00643-201ENST00000334389 ZSCAN18Q8TBC5 510 aaPredicted RBP1.65□□□□□ -2.14
LINC00643-201ENST00000334389 ETNPPLQ8TBG4 499 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 OIT3Q8WWZ8 545 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 KIFAP3Q92845 792 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 NKD1Q969G9 470 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 C18orf12Q96KH6 178 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 SRPK1Q96SB4 655 aaKnown RBP1.65□□□□□ -2.14
LINC00643-201ENST00000334389 SPSB2Q99619 263 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 THUMPD2Q9BTF0 503 aaKnown RBP1.65□□□□□ -2.14
LINC00643-201ENST00000334389 ZDHHC6Q9H6R6 413 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 TDP1Q9NUW8 608 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 CDH9Q9ULB4 789 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 KIAA1024Q9UPX6 916 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 TELO2Q9Y4R8 837 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 SNX14Q9Y5W7 946 aa1.65□□□□□ -2.14
LINC00643-201ENST00000334389 SPTBN2O15020 2390 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 PPIAL4EA0A075B759 164 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 PPIAL4CA0A0B4J2A2 164 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 EDDM13A0A1B0GTR0 161 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 DYTNA2CJ06 578 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 OR5K4A6NMS3 321 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 PPIAL4DF5H284 164 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 NFIBO00712 420 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 INPP4BO15327 924 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 CTSVO60911 334 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 FZD7O75084 574 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 LRRN2O75325 713 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 PRPF40AO75400 957 aaKnown RBP1.65□□□□□ -2.15
LINC00643-201ENST00000334389 FSHBP01225 129 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 PPIAL4FP0DN26 164 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 NDUFV2P19404 249 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 ATP2B1P20020 1258 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 RPL13P26373 211 aaKnown RBP1.65□□□□□ -2.15
LINC00643-201ENST00000334389 L1CAMP32004 1257 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 RORAP35398 523 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 DGKGP49619 791 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 PGDP52209 483 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 ITGA1P56199 1179 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 LILRA4P59901 499 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 RPS14P62263 151 aaKnown RBP1.65□□□□□ -2.15
LINC00643-201ENST00000334389 ZNF33AQ06730 810 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 UBXN2BQ14CS0 331 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 SLC5A9Q2M3M2 681 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 HSDL1Q3SXM5 330 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 CEP55Q53EZ4 464 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 COBLL1Q53SF7 1204 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 ZMAT1Q5H9K5 638 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 RAB41Q5JT25 222 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 MANEAQ5SRI9 462 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 GORABQ5T7V8 394 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 ISLR2Q6UXK2 745 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 ACAD11Q709F0 780 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 SIRT2Q8IXJ6 389 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 CKAP2LQ8IYA6 745 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 CCDC116Q8IYX3 515 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 CHCHD4Q8N4Q1 142 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 POU5F2Q8N7G0 328 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 GBP7Q8N8V2 638 aaPredicted RBP1.65□□□□□ -2.15
LINC00643-201ENST00000334389 B3GALNT2Q8NCR0 500 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 MDGA1Q8NFP4 955 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 OR6P1Q8NGX9 317 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 CUL5Q93034 780 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 C18orf25Q96B23 403 aaPredicted RBP1.65□□□□□ -2.15
LINC00643-201ENST00000334389 C5orf34Q96MH7 638 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 ARID3AQ99856 593 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 TMEM47Q9BQJ4 181 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 WDR83Q9BRX9 315 aaKnown RBP1.65□□□□□ -2.15
LINC00643-201ENST00000334389 PIGMQ9H3S5 423 aa1.65□□□□□ -2.15
LINC00643-201ENST00000334389 TOPORSQ9NS56 1045 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms