RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PFKFB3Q16875 520 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ASB18Q6ZVZ8 466 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ADIPOR2Q86V24 386 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 BBS5Q8N3I7 341 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 HNRNPLLQ8WVV9 542 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 VPS33AQ96AX1 596 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 COQ3Q9NZJ6 369 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 AK6Q9Y3D8 172 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SPACA6W5XKT8 324 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SULT1C2O00338 296 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 TFRCP02786 760 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PON1P27169 355 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 GCLMP48507 274 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLFN13Q68D06 897 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 MFSD6Q6ZSS7 791 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 TBCKQ8TEA7 893 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF416Q9BWM5 594 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 FOXP1Q9H334 677 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 KCNN3Q9UGI6 736 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 DCTN4Q9UJW0 460 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 LRRC14BA6NHZ5 514 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SHOXO15266 292 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 GPRIN2O60269 458 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SNAP91O60641 907 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SNRPA1P09661 255 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 OMPP47874 163 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NOMO3P69849 1222 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NOMO1Q15155 1222 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NIPAL1Q6NVV3 410 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 MB21D2Q8IYB1 491 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NSUN7Q8NE18 718 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SRFBP1Q8NEF9 429 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 TMEM203Q969S6 136 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 C17orf80Q9BSJ5 609 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 BDH2Q9BUT1 245 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 RNF38Q9H0F5 515 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 EPB41L1Q9H4G0 881 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 RC3H2Q9HBD1 1191 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PPARGC1AQ9UBK2 798 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NDUFAF1Q9Y375 327 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 CHD3Q12873 2000 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PGRMC1O00264 195 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 RASA4O43374 803 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 THRBP10828 461 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 VEGFCP49767 419 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ALCAMQ13740 583 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 TPTE2Q6XPS3 522 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC36A4Q6YBV0 504 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 DPY19L4Q7Z388 723 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 TTC7BQ86TV6 843 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PHC2Q8IXK0 858 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 IFT22Q9H7X7 185 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PCDHB8Q9UN66 801 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SCN2AQ99250 2005 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ARL5CA6NH57 179 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PHF20L1A8MW92 1017 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 MATN4O95460 622 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 GCH1P30793 250 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 APLP1P51693 650 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 AFF1P51825 1210 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 GINS1Q14691 196 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ACCSLQ4AC99 568 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 MCEMP1Q8IX19 187 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SUPT20HQ8NEM7 779 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR51D1Q8NGF3 324 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR8K1Q8NGG5 319 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 KCNN1Q92952 543 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 THUMPD3Q9BV44 507 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ARHGEF4Q9NR80 690 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 AGPAT5Q9NUQ2 364 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF532Q9HCE3 1301 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZSCAN5BA6NJL1 495 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 I3L521 148 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PIGNO95427 931 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 KRT31Q15323 416 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 HMGN3Q15651 99 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 KRT35Q92764 455 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 E2F7Q96AV8 911 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 DCAF5Q96JK2 942 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 KCNK13Q9HB14 408 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PRDM9Q9NQV7 894 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 RTEL1Q9NZ71 1219 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 LRFN1Q9P244 771 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ILVBLA1L0T0 632 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 WFS1O76024 890 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 LTKP29376 864 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 BMI1P35226 326 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 FXR2P51116 673 aaKnown RBP eCLIP6.17□□□□□ -1.425e-7■■■■■ 27.7
CDC42BPA-201ENST00000334218 NKAPLQ5M9Q1 402 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 POC1BQ8TC44 478 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 MAGEB10Q96LZ2 347 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 FAM227BQ96M60 508 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 MED28Q9H204 178 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ENTPD7Q9NQZ7 604 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF69Q9UC07 566 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ATP8B3O60423 1300 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 DCLK1O15075 740 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 TCEA3O75764 348 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 TGDSO95455 350 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms