RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 BYSLQ13895 437 aaKnown RBP14.44□□□□□ -0.1
LIMS1-201ENST00000332345 SIM2Q14190 667 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-201ENST00000332345 ARID5BQ14865 1188 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 FNDC3BQ53EP0 1204 aaKnown RBP14.44□□□□□ -0.1
LIMS1-201ENST00000332345 CCDC122Q5T0U0 273 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 SCYL2Q6P3W7 929 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 SERPINA13PQ6UXR4 307 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 CEP68Q76N32 757 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 TMC6Q7Z403 805 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 SLFN11Q7Z7L1 901 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 RASSF3Q86WH2 238 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 DNAAF5Q86Y56 855 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 CNGA4Q8IV77 575 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 HMGB4Q8WW32 186 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 GAB3Q8WWW8 586 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 SORCS1Q8WY21 1168 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 NCAPGQ9BPX3 1015 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 EPC1Q9H2F5 836 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 DEF6Q9H4E7 631 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 RETREG1Q9H6L5 497 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 ABHD10Q9NUJ1 306 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 MYO1AQ9UBC5 1043 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 OR12D3Q9UGF7 316 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 SUN2Q9UH99 717 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 USP34Q70CQ2 3546 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 SSU72P8A0A1W2PR75 194 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 AKR1B15C9JRZ8 316 aaPredicted RBP14.43□□□□□ -0.1
LIMS1-201ENST00000332345 I6L893 689 aaPredicted RBP14.43□□□□□ -0.1
LIMS1-201ENST00000332345 AP5Z1O43299 807 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 CCP110O43303 1012 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 RPP40O75818 363 aaKnown RBP14.43□□□□□ -0.1
LIMS1-201ENST00000332345 RNF8O76064 485 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 PSMA2P25787 234 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 GGCXP38435 758 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 EIF4A3P38919 411 aaKnown RBP14.43□□□□□ -0.1
LIMS1-201ENST00000332345 CSKP41240 450 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 PLK1P53350 603 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 AIF1P55008 147 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 ADKP55263 362 aaKnown RBP14.43□□□□□ -0.1
LIMS1-201ENST00000332345 SULT2A1Q06520 285 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 FUT11Q495W5 492 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 PITRM1Q5JRX3 1037 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 ALYREFQ86V81 257 aaKnown RBP14.43□□□□□ -0.1
LIMS1-201ENST00000332345 CIR1Q86X95 450 aaPredicted RBP14.43□□□□□ -0.1
LIMS1-201ENST00000332345 GAS2L3Q86XJ1 694 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 SUMF1Q8NBK3 374 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 MDGA1Q8NFP4 955 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 FNIP1Q8TF40 1166 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 CYB5D2Q8WUJ1 264 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 NTAN1Q96AB6 310 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 TMPRSS4Q9NRS4 437 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 PPARGC1AQ9UBK2 798 aaKnown RBP14.43□□□□□ -0.1
LIMS1-201ENST00000332345 INTS6Q9UL03 887 aaKnown RBP14.43□□□□□ -0.1
LIMS1-201ENST00000332345 TBC1D30Q9Y2I9 924 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 SNX10Q9Y5X0 201 aa14.43□□□□□ -0.1
LIMS1-201ENST00000332345 DOCK4Q8N1I0 1966 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 IGLV3-10A0A075B6K4 115 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 PRR23AA6NEV1 266 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 ATMINO43313 823 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-201ENST00000332345 GFRA3O60609 400 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 MFAP3LO75121 409 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 CNTN5O94779 1100 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 EPHX1P07099 455 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 SRPRAP08240 638 aaKnown RBP14.42□□□□□ -0.1
LIMS1-201ENST00000332345 OR1E1P30953 314 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 NNMTP40261 264 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 ECT2LQ008S8 904 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 NRG1Q02297 640 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-201ENST00000332345 TBX2Q13207 712 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-201ENST00000332345 ACAP1Q15027 740 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 SLC18A3Q16572 532 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 PLEKHG6Q3KR16 790 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 RAB6CQ53S08 254 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 EFHC2Q5JST6 749 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 RNF219Q5W0B1 726 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-201ENST00000332345 PRR23BQ6ZRT6 265 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 ASCL5Q7RTU5 278 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 SETD3Q86TU7 594 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-201ENST00000332345 C11orf74Q86VG3 221 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 ZNF683Q8IZ20 524 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 KDM1BQ8NB78 822 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 CCDC42Q96M95 316 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 FEM1AQ9BSK4 669 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 TPSD1Q9BZJ3 242 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 ZYG11BQ9C0D3 744 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 RAB6CQ9H0N0 254 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 TMEM245Q9H330 911 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 RAD54BQ9Y620 910 aa14.42□□□□□ -0.1
LIMS1-201ENST00000332345 ZFHX2Q9C0A1 2572 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-201ENST00000332345 SPAG17Q6Q759 2223 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 AKR1B10O60218 316 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 GABRG2P18507 467 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 MZF1P28698 734 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-201ENST00000332345 ZNF75DP51815 510 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 KRT83P78385 493 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 OGDHQ02218 1023 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 SCAPQ12770 1279 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 SRSF5Q13243 272 aaKnown RBP14.41□□□□□ -0.1
LIMS1-201ENST00000332345 PTPRNQ16849 979 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 ALFQ53S48 1182 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms