RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 DEFB107AQ8IZN7 70 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 ZBTB45Q96K62 511 aaPredicted RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 SPATC1LQ9H0A9 340 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 ANKEF1Q9NU02 776 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 SAE1Q9UBE0 346 aaPredicted RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 IQGAP3Q86VI3 1631 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 RBAK-RBAKDNI3L0D1 243 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 PGK1P00558 417 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 PIRTP0C851 137 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 YBX3P16989 372 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLN8-201ENST00000331222 ERCC2P18074 760 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 PTPN3P26045 913 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 CBFBQ13951 182 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 NDUFAF6Q330K2 333 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 CBWD6Q4V339 395 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 TCEAL5Q5H9L2 206 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 SGMS1Q86VZ5 419 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 POU5F2Q8N7G0 328 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 RNF145Q96MT1 663 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 CLEC4AQ9UMR7 237 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 MRPS7Q9Y2R9 242 aaKnown RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 CCT8L1PA6NM43 557 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 ZW10O43264 779 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 HOXA2O43364 376 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 PSTPIP1O43586 416 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 SEC13P55735 322 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 HSPA14Q0VDF9 509 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 ITGA9Q13797 1035 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 PKN2Q16513 984 aaKnown RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 FSCN1Q16658 493 aaKnown RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 FBXO39Q8N4B4 442 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 PURBQ96QR8 312 aaKnown RBP10.77□□□□□ -0.69
CLN8-201ENST00000331222 ZFP14Q9HCL3 533 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 ARL15Q9NXU5 204 aa10.77□□□□□ -0.69
CLN8-201ENST00000331222 A0A0B4J269 797 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 ABHD14A-ACY1A0A1B0GW23 586 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 DYTNA2CJ06 578 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 RPTNQ6XPR3 784 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 SPATA6LQ8N4H0 392 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 SLC35C2Q9NQQ7 365 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 PNMA8CA0A1B0GUJ8 204 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 TPBGLP0DKB5 382 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 ALAS2P22557 587 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 DGKZQ13574 1117 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 RABL6Q3YEC7 729 aaPredicted RBP10.76□□□□□ -0.69
CLN8-201ENST00000331222 SLC2A14Q8TDB8 520 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 PAFAH2Q99487 392 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 SEMA4BQ9NPR2 832 aaPredicted RBP10.76□□□□□ -0.69
CLN8-201ENST00000331222 SH3GLB1Q9Y371 365 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 SCGNO76038 276 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 LRATO95237 230 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 VAPBO95292 243 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 ABL2P42684 1182 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 TBX2Q13207 712 aaPredicted RBP10.76□□□□□ -0.69
CLN8-201ENST00000331222 RAP1GAP2Q684P5 730 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 ZNF677Q86XU0 584 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 PRCCQ92733 491 aaPredicted RBP10.76□□□□□ -0.69
CLN8-201ENST00000331222 TMEM237Q96Q45 408 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 SLC40A1Q9NP59 571 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 KCNQ5Q9NR82 932 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 MRPL17Q9NRX2 175 aaKnown RBP10.76□□□□□ -0.69
CLN8-201ENST00000331222 OGDHLQ9ULD0 1010 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 MYPNQ86TC9 1320 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 ATXN2Q99700 1313 aaKnown RBP10.76□□□□□ -0.69
CLN8-201ENST00000331222 IGSF6O95976 241 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 RPL4P36578 427 aaKnown RBP10.76□□□□□ -0.69
CLN8-201ENST00000331222 FASTKQ14296 549 aaKnown RBP10.76□□□□□ -0.69
CLN8-201ENST00000331222 CCSAPQ6IQ19 270 aaPredicted RBP10.76□□□□□ -0.69
CLN8-201ENST00000331222 NPNTQ6UXI9 565 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 LRRC6Q86X45 466 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 TAS1R2Q8TE23 839 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 CDCA5Q96FF9 252 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 TBL1YQ9BQ87 522 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 DIABLOQ9NR28 239 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 AHSPQ9NZD4 102 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 PDE5AO76074 875 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 FAM228BP0C875 321 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 THRAP10827 490 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 CPA3P15088 417 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 NRF1Q16656 503 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 ZNF470Q6ECI4 717 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 ZNF544Q6NX49 715 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 CXCL17Q6UXB2 119 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 ZBTB10Q96DT7 871 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 NDNQ99608 321 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 KCND2Q9NZV8 630 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 INVSQ9Y283 1065 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 OR10H1Q9Y4A9 318 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 HES2Q9Y543 173 aa10.76□□□□□ -0.69
CLN8-201ENST00000331222 TIMM44O43615 452 aa10.75□□□□□ -0.69
CLN8-201ENST00000331222 ZBTB14O43829 449 aa10.75□□□□□ -0.69
CLN8-201ENST00000331222 ZNF189O75820 626 aaPredicted RBP10.75□□□□□ -0.69
CLN8-201ENST00000331222 BMP10O95393 424 aa10.75□□□□□ -0.69
CLN8-201ENST00000331222 SERPINF2P08697 491 aa10.75□□□□□ -0.69
CLN8-201ENST00000331222 TSPAN19P0C672 248 aa10.75□□□□□ -0.69
CLN8-201ENST00000331222 HPCAL1P37235 193 aa10.75□□□□□ -0.69
CLN8-201ENST00000331222 STXBP1P61764 594 aaKnown RBP10.75□□□□□ -0.69
CLN8-201ENST00000331222 CNTN2Q02246 1040 aa10.75□□□□□ -0.69
CLN8-201ENST00000331222 BST2Q10589 180 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms