RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ADAM19Q9H013 955 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 INTS2Q9H0H0 1204 aaKnown RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 NUP62CLQ9H1M0 184 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 RASSF4Q9H2L5 321 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 NMUR1Q9HB89 426 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 FBRSL1Q9HCM7 1045 aaKnown RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 ARHGEF4Q9NR80 690 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 DLL3Q9NYJ7 618 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 MARCH2Q9P0N8 246 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 DEC1Q9P2X7 70 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 PCDHB4Q9Y5E5 795 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 BIN1O00499 593 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 IRAK2O43187 625 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TIMM44O43615 452 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TULP3O75386 442 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 RPP40O75818 363 aaKnown RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 RHOBTB1O94844 696 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TGFB1P01137 390 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 GLI1P08151 1106 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 CD19P15391 556 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TGM1P22735 817 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 HOXD12P35452 270 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 ID4P47928 161 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 PGFP49763 221 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 SNX16P57768 344 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 ENPP2Q13822 863 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 CRY1Q16526 586 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 MAN2A1Q16706 1144 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 USP39Q53GS9 565 aaKnown RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 MPP7Q5T2T1 576 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TTC39BQ5VTQ0 682 aaPredicted RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 ISM2Q6H9L7 571 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 GRAMD4Q6IC98 578 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 PKN3Q6P5Z2 889 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 RBM43Q6ZSC3 357 aaKnown RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 ACAD11Q709F0 780 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 C12orf40Q86WS4 652 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 IRF2BP1Q8IU81 584 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 UNC45BQ8IWX7 931 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 SIX6OS1Q8N1H7 587 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 IL17RCQ8NAC3 791 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TSTD1Q8NFU3 115 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TFAP2BQ92481 460 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 SHC3Q92529 594 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 SPACA7Q96KW9 195 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 KREMEN1Q96MU8 473 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 IPO9Q96P70 1041 aaKnown RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 GBP4Q96PP9 640 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 MED15Q96RN5 788 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 GABRG3Q99928 467 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 BBS2Q9BXC9 721 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 ULBP1Q9BZM6 244 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 LACRTQ9GZZ8 138 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 NPHS2Q9NP85 383 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 ASNSD1Q9NWL6 643 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 APEX2Q9UBZ4 518 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 EML5Q05BV3 1969 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 M0QYV0 167 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 TBX18O95935 607 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 LTFP02788 710 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 CYBBP04839 570 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 CISD3P0C7P0 127 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 ZNF806P0C7X5 589 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 TYRP14679 529 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 EPHA1P21709 976 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 NTSR1P30989 418 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 GPD2P43304 727 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 HARS2P49590 506 aaKnown RBP6.6□□□□□ -1.35
SMG1-201ENST00000330588 BPIFB4P59827 614 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 DMWDQ09019 674 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 ADIGQ0VDE8 80 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 ELF2Q15723 593 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 EXOC3L4Q17RC7 722 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 FYB2Q5VWT5 728 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 BSPRYQ5W0U4 402 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 NUGGCQ68CJ6 796 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 CEP68Q76N32 757 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 RSRC2Q7L4I2 434 aaKnown RBP6.6□□□□□ -1.35
SMG1-201ENST00000330588 KIAA0907Q7Z7F0 614 aaPredicted RBP6.6□□□□□ -1.35
SMG1-201ENST00000330588 TMEM110Q86TL2 294 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 TMEM25Q86YD3 366 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 ARHGEF19Q8IW93 802 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMG1-201ENST00000330588 NETO1Q8TDF5 533 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 WFIKKN2Q8TEU8 576 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 RNF139Q8WU17 664 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 GOLGA1Q92805 767 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 CCDC74AQ96AQ1 378 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 DDX50Q9BQ39 737 aaKnown RBP6.6□□□□□ -1.35
SMG1-201ENST00000330588 ZSWIM1Q9BR11 485 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 RTKNQ9BST9 563 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 LHX5Q9H2C1 402 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 FBRSQ9HAH7 460 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 CD248Q9HCU0 757 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 LATS2Q9NRM7 1088 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 LMBRD1Q9NUN5 540 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 C2orf42Q9NWW7 574 aa6.6□□□□□ -1.35
SMG1-201ENST00000330588 KIAA1522Q9P206 1035 aaPredicted RBP6.6□□□□□ -1.35
SMG1-201ENST00000330588 PIEZO1Q92508 2521 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms