RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 TCF12Q99081 682 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 SLC4A5Q9BY07 1137 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 VPS33BQ9H267 617 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 SMARCAD1Q9H4L7 1026 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 ZNF395Q9H8N7 513 aaPredicted RBP8.57□□□□□ -1.04
SKA2-201ENST00000330137 NANOGQ9H9S0 305 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 WDR41Q9HAD4 459 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 ZC3H7BQ9UGR2 993 aaKnown RBP8.57□□□□□ -1.04
SKA2-201ENST00000330137 IVNS1ABPQ9Y6Y0 642 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 ILVBLA1L0T0 632 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 ISPDA4D126 451 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L15C9J2P7 530 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L13C9JLJ4 530 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L11C9JVI0 530 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L18D6R9N7 530 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L22D6RA61 530 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L17D6RBQ6 530 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L19D6RCP7 530 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L20D6RJB6 530 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 ZBTB14O43829 449 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 NUAK1O60285 661 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 UFL1O94874 794 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 OSBPP22059 807 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 POLR2BP30876 1174 aaKnown RBP8.57□□□□□ -1.04
SKA2-201ENST00000330137 RFC1P35251 1148 aaPredicted RBP8.57□□□□□ -1.04
SKA2-201ENST00000330137 LEPRP48357 1165 aaKnown RBP8.57□□□□□ -1.04
SKA2-201ENST00000330137 PEX3P56589 373 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 TUBA1BP68363 451 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 CLDN10P78369 228 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 MS4A2Q01362 244 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L24Q0WX57 530 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 BNIP3Q12983 259 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 MTMR2Q13614 643 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 PDE1CQ14123 709 aaPredicted RBP8.57□□□□□ -1.04
SKA2-201ENST00000330137 SNRNP35Q16560 246 aaKnown RBP8.57□□□□□ -1.04
SKA2-201ENST00000330137 HADHQ16836 314 aaKnown RBP8.57□□□□□ -1.04
SKA2-201ENST00000330137 SLC36A3Q495N2 470 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 SPATS1Q496A3 300 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 USP17L6PQ6QN14 398 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 C15orf39Q6ZRI6 1047 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 ZBTB49Q6ZSB9 765 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 TUBA1AQ71U36 451 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 TFAP2DQ7Z6R9 452 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 WNK4Q96J92 1243 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 KLHL32Q96NJ5 620 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 SLC38A10Q9HBR0 1119 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 TCF7L2Q9NQB0 619 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
SKA2-201ENST00000330137 IGLV3-22A0A075B6J6 115 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 ARHGEF35A5YM69 484 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 NOP56O00567 594 aaKnown RBP8.56□□□□□ -1.04
SKA2-201ENST00000330137 ALDH1A2O94788 518 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 CHEK2O96017 543 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 M6PRP20645 277 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 MAGEA3P43357 314 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 YWHAZP63104 245 aaKnown RBP8.56□□□□□ -1.04
SKA2-201ENST00000330137 GAD2Q05329 585 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 PMS2P3Q13401 168 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 ART3Q13508 389 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 C6orf183Q5T699 404 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
SKA2-201ENST00000330137 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 SLC16A10Q8TF71 515 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 SEPT8Q92599 483 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 HPS1Q92902 700 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 SH3YL1Q96HL8 342 aaPredicted RBP8.56□□□□□ -1.04
SKA2-201ENST00000330137 CBWD1Q9BRT8 395 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 AMNQ9BXJ7 453 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 KLHL25Q9H0H3 589 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 IKZF4Q9H2S9 585 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 COG4Q9H9E3 785 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 ANKHQ9HCJ1 492 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 NXF1Q9UBU9 619 aaKnown RBP8.56□□□□□ -1.04
SKA2-201ENST00000330137 AGTPBP1Q9UPW5 1226 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 USTQ9Y2C2 406 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 TRAF6Q9Y4K3 522 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 TANC1Q9C0D5 1861 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 COL4A1P02462 1669 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 A0A1B0GTW7 788 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 TCRBV7S3A2A0A539 114 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 NOTOA8MTQ0 251 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 KPNA7A9QM74 516 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 USP17L10C9JJH3 530 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 AIM2O14862 343 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 MSI1O43347 362 aaKnown RBP8.56□□□□□ -1.04
SKA2-201ENST00000330137 SCO2O43819 266 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 AVILO75366 819 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 GYS1P13807 737 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 TBXAS1P24557 533 aaPredicted RBP8.56□□□□□ -1.04
SKA2-201ENST00000330137 DSG3P32926 999 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 GDF10P55107 478 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 BASP1P80723 227 aaKnown RBP8.56□□□□□ -1.04
SKA2-201ENST00000330137 MERTKQ12866 999 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 SELENBP1Q13228 472 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 SELPLGQ14242 412 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 CBX2Q14781 532 aaPredicted RBP8.56□□□□□ -1.04
SKA2-201ENST00000330137 MAPRE2Q15555 327 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 QRICH1Q2TAL8 776 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 ZFYVE27Q5T4F4 411 aa8.56□□□□□ -1.04
SKA2-201ENST00000330137 GPR107Q5VW38 600 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms