RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 RTP2Q5QGT7 225 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 LVRNQ6Q4G3 990 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 YTHDF3Q7Z739 585 aaKnown RBP16.27■□□□□ 0.2
PGBD2-201ENST00000329291 LRRC6Q86X45 466 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 ARHGAP12Q8IWW6 846 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 GSDMBQ8TAX9 411 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 TCP10LQ8TDR4 215 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 HDAC11Q96DB2 347 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 STAMBPL1Q96FJ0 436 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 FUBP3Q96I24 572 aaKnown RBP eCLIP16.27■□□□□ 0.2
PGBD2-201ENST00000329291 TOX2Q96NM4 488 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 HAPLN3Q96S86 360 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 SSU72Q9NP77 194 aaKnown RBP16.27■□□□□ 0.2
PGBD2-201ENST00000329291 MOCS1Q9NZB8 636 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 GMIPQ9P107 970 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 SLC17A6Q9P2U8 582 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 PCDHB5Q9Y5E4 795 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 IKBKGQ9Y6K9 419 aa16.27■□□□□ 0.2
PGBD2-201ENST00000329291 SDR42E2A6NKP2 422 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 NCAM2O15394 837 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 MOCS2O96007 188 aaPredicted RBP16.27■□□□□ 0.19
PGBD2-201ENST00000329291 JCHAINP01591 159 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 PYGBP11216 843 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 ADRA1DP25100 572 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 CCR1P32246 355 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 SMAD1Q15797 465 aaKnown RBP16.27■□□□□ 0.19
PGBD2-201ENST00000329291 TRIM60Q495X7 471 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 MANEALQ5VSG8 457 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 CASC4Q6P4E1 433 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 CES3Q6UWW8 571 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 MON1AQ86VX9 555 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 C10orf67Q8IYJ2 551 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 ZNF276Q8N554 614 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 OTUD6BQ8N6M0 293 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 OR52K1Q8NGK4 314 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 ZNF419Q96HQ0 510 aaPredicted RBP16.27■□□□□ 0.19
PGBD2-201ENST00000329291 MLPHQ9BV36 600 aaPredicted RBP16.27■□□□□ 0.19
PGBD2-201ENST00000329291 CRISPLD2Q9H0B8 497 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 SYBUQ9NX95 663 aa16.27■□□□□ 0.19
PGBD2-201ENST00000329291 LAMA2P24043 3122 aaKnown RBP16.26■□□□□ 0.19
PGBD2-201ENST00000329291 IQANK1A0A1B0GTG1 560 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 TRIM49D1C9J1S8 452 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 GALTP07902 379 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 SARNPP82979 210 aaKnown RBP16.26■□□□□ 0.19
PGBD2-201ENST00000329291 TLE2Q04725 743 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 DNAJC3Q13217 504 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 BMPR2Q13873 1038 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 BRMS1LQ5PSV4 323 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 STEAP4Q687X5 459 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 RNF19BQ6ZMZ0 732 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 FAM47EQ6ZV65 393 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 CNTD1Q8N815 330 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 CCT6BQ92526 530 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 SLCO1B3Q9NPD5 702 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 WBP1LQ9NX94 342 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 SAMD15Q9P1V8 674 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 HS3ST4Q9Y661 456 aa16.26■□□□□ 0.19
PGBD2-201ENST00000329291 TBKBP1A7MCY6 615 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 TBC1D4O60343 1298 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 GSTA2P09210 222 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 NFKB1P19838 968 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 MX2P20592 715 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 LIG3P49916 1009 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 TEX44Q53QW1 395 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 KCTD11Q693B1 232 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 OTOP3Q7RTS5 596 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 DEFB128Q7Z7B8 93 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.25■□□□□ 0.19
PGBD2-201ENST00000329291 FERMT1Q9BQL6 677 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 TMEM175Q9BSA9 504 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 IL37Q9NZH6 218 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 IL1RAPL1Q9NZN1 696 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 MPP6Q9NZW5 540 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 ATXN2Q99700 1313 aaKnown RBP16.25■□□□□ 0.19
PGBD2-201ENST00000329291 TANC1Q9C0D5 1861 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 WDR91A4D1P6 747 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 DFFAO00273 331 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 KIAA0754O94854 1291 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 CYP2C18P33260 490 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 ZNF135P52742 658 aaPredicted RBP16.25■□□□□ 0.19
PGBD2-201ENST00000329291 SLC18A2Q05940 514 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 PPP2R5DQ14738 602 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 TTC39BQ5VTQ0 682 aaPredicted RBP16.25■□□□□ 0.19
PGBD2-201ENST00000329291 HHATQ5VTY9 493 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 ZNF280DQ6N043 979 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 FUT10Q6P4F1 479 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 CDHR3Q6ZTQ4 885 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 USP33Q8TEY7 942 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 TEKT5Q96M29 485 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 FCRL3Q96P31 734 aaPredicted RBP16.25■□□□□ 0.19
PGBD2-201ENST00000329291 SLC39A8Q9C0K1 460 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 BRD8Q9H0E9 1235 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 NSRP1Q9H0G5 558 aaKnown RBP16.25■□□□□ 0.19
PGBD2-201ENST00000329291 ALG13Q9NP73 1137 aaKnown RBP16.25■□□□□ 0.19
PGBD2-201ENST00000329291 UBP1Q9NZI7 540 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 GGT7Q9UJ14 662 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 ZNF180Q9UJW8 692 aa16.25■□□□□ 0.19
PGBD2-201ENST00000329291 OR6C75A6NL08 312 aa16.24■□□□□ 0.19
PGBD2-201ENST00000329291 RFPL1O75677 317 aa16.24■□□□□ 0.19
PGBD2-201ENST00000329291 ALDH1A2O94788 518 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms